LOCUS       AQA20330.1               770 aa    PRT              BCT 03-FEB-2017
DEFINITION  Halioglobus japonicus hypothetical protein protein.
ACCESSION   CP019450-2980
PROTEIN_ID  AQA20330.1
SOURCE      Halioglobus japonicus
  ORGANISM  Halioglobus japonicus
            Bacteria; Proteobacteria; Gammaproteobacteria; Cellvibrionales;
            Halieaceae; Halioglobus.
REFERENCE   1  (bases 1 to 4085301)
  AUTHORS   Kumagai,Y., Yoshizawa,S. and Kogure,K.
  TITLE     Trade-off between light-utilization and light-protection in marine
            flavobacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4085301)
  AUTHORS   Kumagai,Y., Yoshizawa,S. and Kogure,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2017) Marine Microbiology, Atmosphere and Ocean
            Research Institute, The University of Tokyo, 5-1-5, Kashiwanoha,
            Kashiwa-shi, Chiba 277-8564, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Sprai v. 0.9.5.1.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 25.22x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/25/2017 14:24:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.0
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,896
            CDS (total)                       :: 3,844
            Genes (coding)                    :: 3,581
            CDS (coding)                      :: 3,581
            Genes (RNA)                       :: 52
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 263
            Pseudo Genes (ambiguous residues) :: 0 of 263
            Pseudo Genes (frameshifted)       :: 228 of 263
            Pseudo Genes (incomplete)         :: 31 of 263
            Pseudo Genes (internal stop)      :: 12 of 263
            Pseudo Genes (multiple problems)  :: 8 of 263
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Halioglobus japonicus"
                     /mol_type="genomic DNA"
                     /strain="NBRC 107739"
                     /isolation_source="Western North Pacific Station S1"
                     /culture_collection="NBRC:107739"
                     /type_material="type strain of Halioglobus japonicus"
                     /db_xref="taxon:930805"
                     /country="Pacific Ocean: Western North Pacific Station S1"
                     /collection_date="09-Feb-2010"
     protein         /locus_tag="BST95_15075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007187203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MLKWRHNDKR PCMQLRLSLT LGLTTSLTAA AAQAQPLDTR LEEVIVTAQL VEQSARETPL
       61 SLVTLEQDTL RDLGIAGIDD IRAQVPNFVI DRFPSSQQTL RLFVRGLGIT DVQITQDPAV
      121 GVYLDGVYLA RSTGLATDVA DLERIEVLRG PQGTLYGRNT TGGALNMVTS KPDAERPAAN
      181 MELGAGNRDR RFAKASVNLP LGGEHAIKLA ALGHRIDGFI GNQGPGGGFG DYRGEAYRFD
      241 WRWQPGDQLT LDYSWDKSRL ETYNYTPQAV APGIPTGTPV DAAIISSQRF VTYSERRLDT
      301 LATSVPLLPT DTTIEGHALS LSWDWSPLTL KSITAWRELT DDSYIDFASG ASEEYRVDFS
      361 AISLGNGEQT YPSVRTRVDQ EQFSQEFQAL GQWQSLDAIA GLYYFEEKAR ENWFPMHHIF
      421 SFPIIESGDQ AVAVNIRAED NQIENQALAI YNQLTWHATD VWHLSLGWRY SRDQREVERL
      481 FRQENYVDFG DVVLGPFETS DFEAAAKEDF NNLSFSASVE HDWSEGTRLY AKVVEAYKSG
      541 GFNTRDPNPE SFAKGFDEEI NRTAEIGLKG VWLQQALRFS LAAFYSDIED MQLNFLLPNS
      601 ISDTRVFNSG SATLSGIELE ASAFLSSKLL ARVSYAYLDT DIDDVIDPFS GESRRFYFDN
      661 APNNSASFNV DYAIADFSWG SWALNINGSY TDERKKQDDQ LAIDSYSLLG ARLSLSDIAV
      721 AKGELSVSAW IQNALDEDYV TFTIDNLPHA SRAVYWGEPR SWGLDLRYSY
//