LOCUS AQA19912.1 543 aa PRT BCT 03-FEB-2017
DEFINITION Halioglobus japonicus NAD+ synthase protein.
ACCESSION CP019450-3624
PROTEIN_ID AQA19912.1
SOURCE Halioglobus japonicus
ORGANISM Halioglobus japonicus
Bacteria; Proteobacteria; Gammaproteobacteria; Cellvibrionales;
Halieaceae; Halioglobus.
REFERENCE 1 (bases 1 to 4085301)
AUTHORS Kumagai,Y., Yoshizawa,S. and Kogure,K.
TITLE Trade-off between light-utilization and light-protection in marine
flavobacteria
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 4085301)
AUTHORS Kumagai,Y., Yoshizawa,S. and Kogure,K.
TITLE Direct Submission
JOURNAL Submitted (23-JAN-2017) Marine Microbiology, Atmosphere and Ocean
Research Institute, The University of Tokyo, 5-1-5, Kashiwanoha,
Kashiwa-shi, Chiba 277-8564, Japan
COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (released 2013). Information about the Pipeline can be
found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
##Genome-Assembly-Data-START##
Assembly Method :: Sprai v. 0.9.5.1.3
Genome Representation :: Full
Expected Final Version :: Yes
Genome Coverage :: 25.22x
Sequencing Technology :: PacBio
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Date :: 01/25/2017 14:24:47
Annotation Pipeline :: NCBI Prokaryotic Genome
Annotation Pipeline
Annotation Method :: Best-placed reference protein
set; GeneMarkS+
Annotation Software revision :: 4.0
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;
repeat_region
Genes (total) :: 3,896
CDS (total) :: 3,844
Genes (coding) :: 3,581
CDS (coding) :: 3,581
Genes (RNA) :: 52
rRNAs :: 2, 2, 2 (5S, 16S, 23S)
complete rRNAs :: 2, 2, 2 (5S, 16S, 23S)
tRNAs :: 42
ncRNAs :: 4
Pseudo Genes (total) :: 263
Pseudo Genes (ambiguous residues) :: 0 of 263
Pseudo Genes (frameshifted) :: 228 of 263
Pseudo Genes (incomplete) :: 31 of 263
Pseudo Genes (internal stop) :: 12 of 263
Pseudo Genes (multiple problems) :: 8 of 263
##Genome-Annotation-Data-END##
FEATURES Qualifiers
source /organism="Halioglobus japonicus"
/mol_type="genomic DNA"
/strain="NBRC 107739"
/isolation_source="Western North Pacific Station S1"
/culture_collection="NBRC:107739"
/type_material="type strain of Halioglobus japonicus"
/db_xref="taxon:930805"
/country="Pacific Ocean: Western North Pacific Station S1"
/collection_date="09-Feb-2010"
protein /locus_tag="BST95_18335"
/inference="COORDINATES: similar to AA
sequence:RefSeq:WP_007640211.1"
/note="NH(3)-dependent; catalyzes the formation of
nicotinamide adenine dinucleotide (NAD) from nicotinic
acid adenine dinucleotide (NAAD) using either ammonia or
glutamine as the amide donor and ATP; ammonia-utilizing
enzymes include the ones from Bacillus and Escherichia
coli while glutamine-utilizing enzymes include the
Mycobacterial one; forms homodimers; Derived by automated
computational analysis using gene prediction method:
Protein Homology."
/transl_table=11
BEGIN
1 MTTLNILMAQ MNTLVGDFDG NTERVIETVQ RAEQEHAAPV VVFPELTLSG YPPEDLLLRP
61 SIELRVNQSL EKICAALSGD AYAVIGYPRK DGDALYNVAG VVHRGEIIAE YRKQCLPNYQ
121 VFDEKRYFEA GHEPCVVDIH GIPVGLSICE DIWEEAPTLD VAEAGAALLL NLNSSPYHRG
181 KRSERWELIA ARAKAAGFPI VYVNQVGGQD ELVFDGGSFA VSAEGEVVAA APSFEEGEYW
241 LHYDAEQAEA PFSGVSVVEP LEEMEATWRA LVLGVRDYVN KNRFKGVVLG LSGGIDSALT
301 LAVAVEALGP ERVEAVMMPF RYTSQMSVED AAEQSRTLGV SHKVISIEPI YESFMAALAD
361 EFAGAAADTT EENLQARCRG VLLMSISNKK GYLVLTTGNK SEMAVGYSTL YGDMAGGFDA
421 LKDVPKTLVF DLCRYRNTLG PCIPQRVIDR PPSAELAPDQ KDEDSLPPYD VLDQILEMYV
481 EQDMSAEAII ASGMDREQVQ RVLRMVDINE YKRRQAPIGV RITRRGFGRD RRYPITSGWR
541 IGE
//