LOCUS       AQA19630.1               799 aa    PRT              BCT 03-FEB-2017
DEFINITION  Halioglobus japonicus hypothetical protein protein.
ACCESSION   CP019450-3304
PROTEIN_ID  AQA19630.1
SOURCE      Halioglobus japonicus
  ORGANISM  Halioglobus japonicus
            Bacteria; Proteobacteria; Gammaproteobacteria; Cellvibrionales;
            Halieaceae; Halioglobus.
REFERENCE   1  (bases 1 to 4085301)
  AUTHORS   Kumagai,Y., Yoshizawa,S. and Kogure,K.
  TITLE     Trade-off between light-utilization and light-protection in marine
            flavobacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4085301)
  AUTHORS   Kumagai,Y., Yoshizawa,S. and Kogure,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2017) Marine Microbiology, Atmosphere and Ocean
            Research Institute, The University of Tokyo, 5-1-5, Kashiwanoha,
            Kashiwa-shi, Chiba 277-8564, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Sprai v. 0.9.5.1.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 25.22x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/25/2017 14:24:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.0
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,896
            CDS (total)                       :: 3,844
            Genes (coding)                    :: 3,581
            CDS (coding)                      :: 3,581
            Genes (RNA)                       :: 52
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 263
            Pseudo Genes (ambiguous residues) :: 0 of 263
            Pseudo Genes (frameshifted)       :: 228 of 263
            Pseudo Genes (incomplete)         :: 31 of 263
            Pseudo Genes (internal stop)      :: 12 of 263
            Pseudo Genes (multiple problems)  :: 8 of 263
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Halioglobus japonicus"
                     /mol_type="genomic DNA"
                     /strain="NBRC 107739"
                     /isolation_source="Western North Pacific Station S1"
                     /culture_collection="NBRC:107739"
                     /type_material="type strain of Halioglobus japonicus"
                     /db_xref="taxon:930805"
                     /country="Pacific Ocean: Western North Pacific Station S1"
                     /collection_date="09-Feb-2010"
     protein         /locus_tag="BST95_16705"
                     /inference="COORDINATES: protein motif:HMM:PF07715.13"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MPVFGASLLL PVSGPAALAQ ESAPNSLVLE EILVTASRRV ERLQEVGMSV SAFGSDFLQS
       61 TGVNQLTDLE QYTPNLKITP STDSNGTSYR IRGIGSVGTN SGIDPSVGMF IDGVYQGRAG
      121 MSISDLIDVE RIEVLRGPQG TLYGKNTAAG AISIITKQPT NEFEYLAEAG YDSEERMELR
      181 GMVNVPLGDS GHAMRLSAYG IDGDHMYRNT YTGKGINDAN KYGGRARLLF DFEGDTTTDG
      241 FGQFILSLDY SKEDTDCCAL ATITYEGLST LNSPITSTPS AQWQEMLGNN ALGQPILRFN
      301 DFETAEGFSP PEADPFGDDY WFNADLGNEV DVGGAALEWN RDLESGSTIT FINAWRFYES
      361 LSMFDGDFTA YDASRTTTDI DLDQYSSELR ITSEGGETID YQAGLYAYRS TLDSQGDFEQ
      421 REDLLEKIVL FGDITMADFS PGGSTNIDTN EYITTSYAAF GQAVWNITEA FSTTLGLRYT
      481 YEKKERVGTQ ITTPSVPFDT PPIAGPDIAY DDDRSDTALS PSLNFRYFFN PDVMGYAMVS
      541 RGFKSGGYDQ RRQALGETGE FDEEISTSYE LGWKTSWGNR RVQFNGALFF VDYEDFQAQS
      601 FDGASLKVTN AGDMESYGAE LEFTYLPTTN VIFGSALGYN KAEYKSFDNG QCTVQQSFEQ
      661 YYIIEGAQGG TPGTASVCLQ DLAGQPIDNA PEWTISSYIQ YDHEMGSDLV GTARLEHSYT
      721 DSYFLDQDLD PNLENDSVNL INLRLTLSNQ ARTWEAILWG RNLLDEEYYS WGIDAPTVGG
      781 YAGVVAPGST YGVTLRMMN
//