LOCUS AQA18586.1 618 aa PRT BCT 03-FEB-2017 DEFINITION Halioglobus japonicus propionyl-CoA synthetase protein. ACCESSION CP019450-2063 PROTEIN_ID AQA18586.1 SOURCE Halioglobus japonicus ORGANISM Halioglobus japonicus Bacteria; Proteobacteria; Gammaproteobacteria; Cellvibrionales; Halieaceae; Halioglobus. REFERENCE 1 (bases 1 to 4085301) AUTHORS Kumagai,Y., Yoshizawa,S. and Kogure,K. TITLE Trade-off between light-utilization and light-protection in marine flavobacteria JOURNAL Unpublished REFERENCE 2 (bases 1 to 4085301) AUTHORS Kumagai,Y., Yoshizawa,S. and Kogure,K. TITLE Direct Submission JOURNAL Submitted (23-JAN-2017) Marine Microbiology, Atmosphere and Ocean Research Institute, The University of Tokyo, 5-1-5, Kashiwanoha, Kashiwa-shi, Chiba 277-8564, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Sprai v. 0.9.5.1.3 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 25.22x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 01/25/2017 14:24:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 4.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 3,896 CDS (total) :: 3,844 Genes (coding) :: 3,581 CDS (coding) :: 3,581 Genes (RNA) :: 52 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 263 Pseudo Genes (ambiguous residues) :: 0 of 263 Pseudo Genes (frameshifted) :: 228 of 263 Pseudo Genes (incomplete) :: 31 of 263 Pseudo Genes (internal stop) :: 12 of 263 Pseudo Genes (multiple problems) :: 8 of 263 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Halioglobus japonicus" /mol_type="genomic DNA" /strain="NBRC 107739" /isolation_source="Western North Pacific Station S1" /culture_collection="NBRC:107739" /type_material="type strain of Halioglobus japonicus" /db_xref="taxon:930805" /country="Pacific Ocean: Western North Pacific Station S1" /collection_date="09-Feb-2010" protein /gene="prpE" /locus_tag="BST95_10410" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_007228903.1" /note="catalyzes the formation of propionyl-CoA using propionate as a substrate; PrpE from Ralstonia solanacearum can produce acetyl-, propionyl-, butyryl- and acrylyl-coenzyme A, and Salmonella enterica produces propionyl- and butyryl-coenzyme A; not expressed in Escherichia coli when grown on propionate/minimal media; ATP-dependent; Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MDNLDRWREA AQAVHWFKTP QQVLDDSEPP FYRWFPDGQT NACYNALDVH VAEGRGEQTA 61 LIYDSPVTDT CRRYTYTQLL DQVARFAGVL ADHGVGRGDR VIVYMPMVPE ALIAMLACAR 121 LGAVHSVVFG GFASNELAVR IDDATPKLIV SASCGVEPNR IVAYKPLLDA AIELAQHKPD 181 NCVILQRPMQ PAELIAGRDV DWTQAMADAR AVPCTPVAAN DPLYVLYTSG TTGQPKGVVR 241 DTGGSIVALK WSMKAIYDVE PGDVYWAASD VGWVVGHSYI VYGPLFSGCA TVIYEGKPVG 301 TPDPGAFWRV IEDYQVKVLF TAPTAFRAIK KEDPAGKYLQ QYNVSSLRSL FLAGERCDPS 361 TLAWAQQQLK VPVIDHWWQT ETGWPICANC LGIEALPIVP GSPARPVPGY YVQVLDGNGE 421 QVSAGEIGAL VVKSPLPPGT FTTLWQAEER YQSAYFARYP GYYETGDAGY IDANGYVFVM 481 ARTDDVINVA GHRLSTGAME EVLAEHPDVA ECAVVGVADP MKGQLPLGLL VLNAGAERAT 541 ADVVRESLQL VRDKIGPVAA FKLCTVVERL PKTRSGKILR GTMRSIADGE PWKMPATIDD 601 PVILDEITEA LRTLGYAA //