LOCUS AQA17732.1 677 aa PRT BCT 03-FEB-2017 DEFINITION Halioglobus japonicus S9 family peptidase protein. ACCESSION CP019450-1039 PROTEIN_ID AQA17732.1 SOURCE Halioglobus japonicus ORGANISM Halioglobus japonicus Bacteria; Proteobacteria; Gammaproteobacteria; Cellvibrionales; Halieaceae; Halioglobus. REFERENCE 1 (bases 1 to 4085301) AUTHORS Kumagai,Y., Yoshizawa,S. and Kogure,K. TITLE Trade-off between light-utilization and light-protection in marine flavobacteria JOURNAL Unpublished REFERENCE 2 (bases 1 to 4085301) AUTHORS Kumagai,Y., Yoshizawa,S. and Kogure,K. TITLE Direct Submission JOURNAL Submitted (23-JAN-2017) Marine Microbiology, Atmosphere and Ocean Research Institute, The University of Tokyo, 5-1-5, Kashiwanoha, Kashiwa-shi, Chiba 277-8564, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Sprai v. 0.9.5.1.3 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 25.22x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 01/25/2017 14:24:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 4.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 3,896 CDS (total) :: 3,844 Genes (coding) :: 3,581 CDS (coding) :: 3,581 Genes (RNA) :: 52 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 263 Pseudo Genes (ambiguous residues) :: 0 of 263 Pseudo Genes (frameshifted) :: 228 of 263 Pseudo Genes (incomplete) :: 31 of 263 Pseudo Genes (internal stop) :: 12 of 263 Pseudo Genes (multiple problems) :: 8 of 263 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Halioglobus japonicus" /mol_type="genomic DNA" /strain="NBRC 107739" /isolation_source="Western North Pacific Station S1" /culture_collection="NBRC:107739" /type_material="type strain of Halioglobus japonicus" /db_xref="taxon:930805" /country="Pacific Ocean: Western North Pacific Station S1" /collection_date="09-Feb-2010" protein /locus_tag="BST95_05255" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_013345727.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MSIRMRILGI VCLLPLVVGG CATPPAEEQV ALIERSQLFG NPSRFQGRLS PDGTLMSFRA 61 PLDGVMNIWV APVGDFEAAK PVTRDTGRGV PSHFWALDSV HLLYIQDRDG DENWHMYRVN 121 VGTGEMADLT PYDGVRAVNL GQSERHPGKI VIGMNDRDPR WHDAYLVDLA SAERTLLAEN 181 EGFISLLVDN NLEVRGALAP TDEGGATVLR RSGDEWLPVL DIPVEDYRTS SVLGFDADNK 241 HIYMLDSRNR DKAALVRVDF ATGKTRPIAH SDQADIGSVL MDPRTHKPVA VGVRVHELKW 301 TALDPAFEAD FAALAEQAIG DAEILATTLD ASRWIIYQSR ADGSPVYAVY DRSTRALDTM 361 FVTNPDLEGL PLSPAHNVTI PSRDGLDLVS YLTVPRGVQV DAEGMPSQPG PMVLLVHGGP 421 WARDMAGYSG EVQFLANRGY AVLQVNYRGS SGFGKAFINA GDKQWAANMH NDLVDAVAWA 481 VDAGVADPDS VAIMGTSYGG YATLVGLTFT PELFACGVDV VGPSNLETLI ASIPPYWTSF 541 VRSLINALGD PDTEEGLALL KDRSPVNRVD QIRRPLLIGQ GANDPRVKQA ESDQIVEAMQ 601 ASNIPVTYAL YPDEGHGFQK PENTISFYAL ADGFLSQCLG GRHQPIGDDL QGSSLQVLEG 661 VEGVPGLAEA LEAAERR //