LOCUS AQA17505.1 729 aa PRT BCT 03-FEB-2017 DEFINITION Halioglobus japonicus primosomal protein N' protein. ACCESSION CP019450-769 PROTEIN_ID AQA17505.1 SOURCE Halioglobus japonicus ORGANISM Halioglobus japonicus Bacteria; Proteobacteria; Gammaproteobacteria; Cellvibrionales; Halieaceae; Halioglobus. REFERENCE 1 (bases 1 to 4085301) AUTHORS Kumagai,Y., Yoshizawa,S. and Kogure,K. TITLE Trade-off between light-utilization and light-protection in marine flavobacteria JOURNAL Unpublished REFERENCE 2 (bases 1 to 4085301) AUTHORS Kumagai,Y., Yoshizawa,S. and Kogure,K. TITLE Direct Submission JOURNAL Submitted (23-JAN-2017) Marine Microbiology, Atmosphere and Ocean Research Institute, The University of Tokyo, 5-1-5, Kashiwanoha, Kashiwa-shi, Chiba 277-8564, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Sprai v. 0.9.5.1.3 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 25.22x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 01/25/2017 14:24:47 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 4.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 3,896 CDS (total) :: 3,844 Genes (coding) :: 3,581 CDS (coding) :: 3,581 Genes (RNA) :: 52 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 42 ncRNAs :: 4 Pseudo Genes (total) :: 263 Pseudo Genes (ambiguous residues) :: 0 of 263 Pseudo Genes (frameshifted) :: 228 of 263 Pseudo Genes (incomplete) :: 31 of 263 Pseudo Genes (internal stop) :: 12 of 263 Pseudo Genes (multiple problems) :: 8 of 263 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Halioglobus japonicus" /mol_type="genomic DNA" /strain="NBRC 107739" /isolation_source="Western North Pacific Station S1" /culture_collection="NBRC:107739" /type_material="type strain of Halioglobus japonicus" /db_xref="taxon:930805" /country="Pacific Ocean: Western North Pacific Station S1" /collection_date="09-Feb-2010" protein /locus_tag="BST95_03895" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_007230020.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MTILRLALPT PLRALFDYLP PAGSQSAQLR PGQRLSVPFG HRELCGVLVE VMADPQSTDF 61 ELKQASELLD PEPLLPKTLQ KLCQWAADYY QHPIGEVLAA AFPTRLRKGN PHRGLTIPGW 121 QLTTQGKGLG EGALGRSPRQ AEALAALRQQ GPTSGQQLAA AGIKRPALKS LQDKGLAEPC 181 EISPAHCHAS ARPGLALNNE QAQALQALIA TSEGFSCHLL EGVTGSGKTE VYLQLIAHCL 241 AQGKQALVLI PEIGLTPQTL ARFEQRFDTD IAVLHSGLGE VQRERAWEAA RTGIARIVIG 301 TRSAVLTPMV DPGLIVVDEE HDSSFKQQDG FRYSARDVAV KRGQLERCQV LLGSATPSLE 361 TLHNALQGRY QHHRLTERAG SGELPQLTVL DVRRQPLQAG LSEALVKAVG DTLARGEQSL 421 LFLNRRGFAP TVQCHDCGWI ADCNHCDARL TLHRRQRRLR CHHCGHSEPL PGSCPQCRSE 481 QLLTQGVGTE QAEEFLRQRF PDTALYRVDS DSMQGREAMQ ALVDQVNEGQ PCILLGTQML 541 TKGHHFPAVS LVGVIDMDAL LFSGDFRGEE RAAQLLTQVA GRAGRADTGG QVLIQTHHPE 601 HPCLQGTLSQ TYHEQALAML AERLERNLPP TGNLALLRSD CTDARQGEHF LQTLRHNAQR 661 QMPAGVALIG PLPAPMQRRA GRFRAQLLIH GGERAQVHRA ARLLVSIAQR QKVARNLSWS 721 VDIDPQDMF //