LOCUS       AQA16875.1               561 aa    PRT              BCT 03-FEB-2017
DEFINITION  Halioglobus japonicus aspartate-alanine antiporter protein.
ACCESSION   CP019450-41
PROTEIN_ID  AQA16875.1
SOURCE      Halioglobus japonicus
  ORGANISM  Halioglobus japonicus
            Bacteria; Proteobacteria; Gammaproteobacteria; Cellvibrionales;
            Halieaceae; Halioglobus.
REFERENCE   1  (bases 1 to 4085301)
  AUTHORS   Kumagai,Y., Yoshizawa,S. and Kogure,K.
  TITLE     Trade-off between light-utilization and light-protection in marine
            flavobacteria
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 4085301)
  AUTHORS   Kumagai,Y., Yoshizawa,S. and Kogure,K.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JAN-2017) Marine Microbiology, Atmosphere and Ocean
            Research Institute, The University of Tokyo, 5-1-5, Kashiwanoha,
            Kashiwa-shi, Chiba 277-8564, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Sprai v. 0.9.5.1.3
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 25.22x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/25/2017 14:24:47
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.0
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 3,896
            CDS (total)                       :: 3,844
            Genes (coding)                    :: 3,581
            CDS (coding)                      :: 3,581
            Genes (RNA)                       :: 52
            rRNAs                             :: 2, 2, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 2, 2 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 263
            Pseudo Genes (ambiguous residues) :: 0 of 263
            Pseudo Genes (frameshifted)       :: 228 of 263
            Pseudo Genes (incomplete)         :: 31 of 263
            Pseudo Genes (internal stop)      :: 12 of 263
            Pseudo Genes (multiple problems)  :: 8 of 263
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Halioglobus japonicus"
                     /mol_type="genomic DNA"
                     /strain="NBRC 107739"
                     /isolation_source="Western North Pacific Station S1"
                     /culture_collection="NBRC:107739"
                     /type_material="type strain of Halioglobus japonicus"
                     /db_xref="taxon:930805"
                     /country="Pacific Ocean: Western North Pacific Station S1"
                     /collection_date="09-Feb-2010"
     protein         /locus_tag="BST95_00210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MLGYIFDTLR SNPELAIFLT LGIGYAIGRI RIGNFELGSV TGVLLAGIVV GQLGITIDPL
       61 VKSVFFIMFL FAVGYGVGPQ FVHGIATDGA PQALFAVVIT VLCLLSVYIA AVVAGYDVGF
      121 AAGLLAGSQT ISASIGLATD AINNLDISSE EKQTMLNHIP VAYAVVYLWG TIGTGLILSV
      181 LGPKLLRIDL AEECKRYERE MSGGHPPEAG QTAWHQVEMR AYQLHQEWPV GKTIAHAEAQ
      241 HEGVRVFTQR IRRDGTILEF DEDTVFQAGD IVAVSGKREV IVALGNNHQE VEDRELLDVP
      301 TERVNLVITH KGYAGKTIID LAREKFTRGV YLNKITRGAT SVEIPLLPLT EIHRGDILTI
      361 VGTRKDTSRV VNAMGYADRP SSETDMVWVG LAIAIGGLIG ALTLPVGGVP VTLSTSGGAL
      421 IAGILLGWLR GVHPTFGAVP SGALWMMNSV GLNVFIAVVG ITSGPTFIAG LQEVGFGIFF
      481 WGIFATSVPM LLAPLIGKYI FKFDPAINLG ACGGARTSTA SVAMVGDVAK SNVPMLGYTV
      541 PYAVANTTLT LWGLVIVLML A
//