LOCUS AOW26194.1 444 aa PRT PLN 14-OCT-2016
DEFINITION Candida albicans SC5314 proteasome regulatory particle
base subunit protein.
ACCESSION CP017623-490
PROTEIN_ID AOW26194.1
SOURCE Candida albicans SC5314
ORGANISM Candida albicans SC5314
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
Saccharomycetes; Saccharomycetales; Debaryomycetaceae;
Candida/Lodderomyces clade; Candida.
REFERENCE 1 (bases 1 to 3188341)
AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S.,
Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T.,
Davis,R.W. and Scherer,S.
TITLE The diploid genome sequence of Candida albicans
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004)
PUBMED 15123810
REFERENCE 2 (bases 1 to 3188341)
AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D.,
Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B.,
Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T.
TITLE Assembly of the Candida albicans genome into sixteen supercontigs
aligned on the eight chromosomes
JOURNAL Genome Biol. 8 (4), R52 (2007)
PUBMED 17419877
REFERENCE 3 (bases 1 to 3188341)
AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G.
TITLE Assembly of a phased diploid Candida albicans genome facilitates
allele-specific measurements and provides a simple model for repeat
and indel structure
JOURNAL Genome Biol. 14 (9), R97 (2013)
PUBMED 24025428
REFERENCE 4 (bases 1 to 3188341)
CONSRTM Candida Genome Database
TITLE Direct Submission
JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome
Database, Stanford University, Mail Stop-5120, Stanford, CA 94305,
USA
REMARK Sequence and annotation update by submitter
REFERENCE 5 (bases 1 to 3188341)
AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G.
TITLE Direct Submission
JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome
Database, Stanford University, Mail Stop-5120, Stanford, CA 94305,
USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: Bowtie v. 1.0
Assembly Name :: C_albicans_SC5314_A22
Long Assembly Name :: Candida albicans SC5314 Assembly 22
Genome Coverage :: 700x
Sequencing Technology :: Illumina GAIIx
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: CGD
Annotation Status :: Full annotation
Annotation Version :: A22-s07-m01-r01
URL :: http://www.candidagenome.org/
##Genome-Annotation-Data-END##
FEATURES Qualifiers
source /organism="Candida albicans SC5314"
/mol_type="genomic DNA"
/strain="SC5314"
/host="Homo sapiens"
/culture_collection="ATCC:MYA-2876"
/db_xref="taxon:237561"
/chromosome="1"
/haplotype="A"
/country="USA: New York"
/collected_by="Margarita Silva-Hutner"
protein /gene="RPT1"
/locus_tag="CAALFM_C105240CA"
/note="Putative 26S proteasome regulatory subunit 7;
Hap43p-repressed gene; regulated by Gcn2p and Gcn4p;
overlaps orf19.442"
/transl_table=12
/db_xref="CGD:CAL0000180078"
BEGIN
1 MPPKEDWDKY IPPSEEETSE KITPLTEGDI QVLKTYGTAP YADSLKEIEK DLKTIEERIK
61 TNQGIKESDT GLAPPHLWDV LGDKQRMQEE QSLQVARCTK IIEASQPQQP TGLQNADTKS
121 KYVINIKQIA KFVVGLGERL SPTDIEEGMR VGVDRHKYEI QLPLPPRIDP SVTMMTVEEK
181 PDVTYSDVGG CKEQIEKLRE VVELPLLSPE RFVKLGIDPP KGILLYGPPG TGKTLCARAV
241 ANRTDATFIR VIGSELVQKY VGEGARMVRE LFEMARTKKA CIIFFDEVDA IGGARFDDGA
301 GGDNEVQRTM LELITQLDGF DPRGNIKVMF ATNRPNTLDP ALLRPGRIDR KVEFSLPDLE
361 GRANIFRIHS KTMSVEKDIR WELISRLCPN ATGAELRSVC TEAGMFAIRA RRKVANEKDF
421 LKAVDKVIKG NLKFSSTSQY MQYN
//