LOCUS AOW25790.1 1411 aa PRT PLN 14-OCT-2016 DEFINITION Candida albicans SC5314 transcriptional regulator protein. ACCESSION CP017623-86 PROTEIN_ID AOW25790.1 SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 3188341) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 2 (bases 1 to 3188341) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 3188341) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 4 (bases 1 to 3188341) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter REFERENCE 5 (bases 1 to 3188341) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA COMMENT ##Genome-Assembly-Data-START## Assembly Method :: Bowtie v. 1.0 Assembly Name :: C_albicans_SC5314_A22 Long Assembly Name :: Candida albicans SC5314 Assembly 22 Genome Coverage :: 700x Sequencing Technology :: Illumina GAIIx ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Candida albicans SC5314" /mol_type="genomic DNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="1" /haplotype="A" /country="USA: New York" /collected_by="Margarita Silva-Hutner" protein /gene="SIN3" /locus_tag="CAALFM_C100930CA" /note="Protein similar to S. cerevisiae Sin3p (transcriptional corepressor involved in histone deacetylase recruitment); has paired amphipathic helix PAH1 domain; interacts with ScOpi1p, not CaOpi1p; transposon mutation affects filamentous growth" /transl_table=12 /db_xref="CGD:CAL0000177059" intron_pos 20:2 (1/4) intron_pos 36:1 (2/4) intron_pos 77:0 (3/4) intron_pos 191:2 (4/4) BEGIN 1 MSNHQEPWNN QQRPLGQPFN RQHPPVLPPP ATLEQGGQAF YPLPSLPSLG NGSGHHPHGF 61 NIPSINPASD QIQMGQSPSD QSRQTAELRR PSNVALNPPQ TTNSTHLPPP SSLGHVGNEQ 121 GAYPPTISQP APQASPVIGG VPNRSTTTNV YRPLNVKDAL SYLDQVKVQF SNQAEVYNNF 181 LDIMKDFKSQ SIDTPGVIDR VSTLFRGHPN LIQGFNTFLP PGYKIECSLD PSDPNPIRVT 241 TPTGTTTRPN LSSATYNQRW GGEESSTINQ QEQSSPQSQS AQQAQQFADQ ASMEAQNGAS 301 GQVGFNHAIS YVNKIKTRFA SQPDIYKQFL EILQTYQREQ KQIAEVYEQV TVLFANSPDL 361 LDDFKQFLPD TSNLNYQQTP AQDGYYVNNG TQLPPVGNFQ PAGQATNQQY AQLQQTAAQQ 421 QNNFQGAASP ESVYGAPSNE QVVGKKKSVS EPYQDNYNQE SQYSNMRTGA VPQRGQKVSN 481 KAQVPVPVTT NPTLVPGVPE PVPPSGTVKS TSFSEEIGFF DKVKKAIGNK QTYGDFLKLL 541 NLFTQDIIDK DTLVERVQGF IGDTNVELFN WFKMFVGYED KPQNIENITF KKHHLELSLC 601 KAYGPSYRQL PKAETYMPCS GRDEMCWEVL NDEWVGHPTW ASEDSGFIAH RKNQYEEILF 661 KIEEERLEFD YYMESNLRTI QILETIANRI ANMTPEQKAT FKLPPGLGHN SSTIYKKIIR 721 KIYDKDRGFE VIDALHENPS IAVPIVLKRL KQKDEEWKRA QREWNKVWRE MEQKVFYKSL 781 DHVGLTFKQA DKKLLTVKQL VSEISTVKVE QQNKRLHPLT PKPQEQLNYD FKDNEVLFDI 841 LKLAEVFINK SSTYSVHDRE KLLQFLQFFM SLFFSIPTET IETALVARGR IEKSSEEENE 901 KGDVEMSENG SDSSKKRSRD TDLLKDVLKK QSKSKKDDRS GSPGLQSAEL AIQEANEELE 961 KSSELWITTA NTKFSLNDEN IQTRRDKYNL FCNTTIYVFF RHLQTLYTRL AEIKSMNEKV 1021 GKEIRNRKFP KFAKDLNLLS HQLEDMGVEI VGTKDCYKQV LELSEKLIEG EIEHQWFEES 1081 LRQGYRNRAY KIYTIDKVVQ AMIKHMHSMI TDAKTSEIMV LFENDRLKPV SSAKEQILYR 1141 ISVRSFMSPE ENMFKISFKE SDSSVNIQFI SLDDLTINDH ENVEEKYNYY VTSYVMSHPT 1201 EGVPASKLNM PFARSFIESV DEESVEGRTG SGLKVSVSEN SYSLFFESGS HDEFVSKAVY 1261 KKQDSNSKRE DKLAHLKDLI DGENGWKSSL PEDQNLEVTE QKVAILFDKG GVEFKKFEEV 1321 LNSSDKSKES EANEPTKGAT ENVEVIENNN DNNTEPDAKS ATTENKQEDT IVEETNDSTI 1381 QHDVDDTTAD ETNNTEVLGE NDKAQSETKS S //