LOCUS AOW25774.1 260 aa PRT PLN 14-OCT-2016 DEFINITION Candida albicans SC5314 Rot1p protein. ACCESSION CP017623-70 PROTEIN_ID AOW25774.1 SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 3188341) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 2 (bases 1 to 3188341) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 3188341) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 4 (bases 1 to 3188341) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter REFERENCE 5 (bases 1 to 3188341) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA COMMENT ##Genome-Assembly-Data-START## Assembly Method :: Bowtie v. 1.0 Assembly Name :: C_albicans_SC5314_A22 Long Assembly Name :: Candida albicans SC5314 Assembly 22 Genome Coverage :: 700x Sequencing Technology :: Illumina GAIIx ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Candida albicans SC5314" /mol_type="genomic DNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="1" /haplotype="A" /country="USA: New York" /collected_by="Margarita Silva-Hutner" protein /gene="ROT1" /locus_tag="CAALFM_C100770CA" /note="Similar to S. cerevisiae Rot1p, which is involved in cell wall 1,6-beta-glucan biosynthesis; has predicted transmembrane region; possibly an essential gene, disruptants not obtained by UAU1 method" /transl_table=12 /db_xref="CGD:CAL0000184365" BEGIN 1 MIFSRYFIPI ILTLLTSSPL FVDADPNMEE LEGTWSSKSN TVFTGPGFYD PVEELLIEPD 61 LPGICYSFTK DGHYEEALYR VKPNPKNHSC AVASVTYQHG KYELLSNGSL VLTPIAVDGR 121 QLLSDPCNSE DPSKSTYTRY VQSTWFKTYQ VYVDSYHGRW TLQIYQFDGS KMQPLYLAYK 181 PPVMLPTIAL NPTDEASETA STLGSVSHKI KRSRMRIKRS LENQYRTNAK REIYTEKFDK 241 IWWSSVFCLA LASSYFFLKR //