LOCUS       AOW25762.1              1300 aa    PRT              PLN 14-OCT-2016
DEFINITION  Candida albicans SC5314 DNA-directed RNA polymerase protein.
ACCESSION   CP017623-58
PROTEIN_ID  AOW25762.1
SOURCE      Candida albicans SC5314
  ORGANISM  Candida albicans SC5314
            Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
            Saccharomycetes; Saccharomycetales; Debaryomycetaceae;
            Candida/Lodderomyces clade; Candida.
REFERENCE   1  (bases 1 to 3188341)
  AUTHORS   Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S.,
            Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T.,
            Davis,R.W. and Scherer,S.
  TITLE     The diploid genome sequence of Candida albicans
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004)
   PUBMED   15123810
REFERENCE   2  (bases 1 to 3188341)
  AUTHORS   van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D.,
            Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B.,
            Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T.
  TITLE     Assembly of the Candida albicans genome into sixteen supercontigs
            aligned on the eight chromosomes
  JOURNAL   Genome Biol. 8 (4), R52 (2007)
   PUBMED   17419877
REFERENCE   3  (bases 1 to 3188341)
  AUTHORS   Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G.
  TITLE     Assembly of a phased diploid Candida albicans genome facilitates
            allele-specific measurements and provides a simple model for repeat
            and indel structure
  JOURNAL   Genome Biol. 14 (9), R97 (2013)
   PUBMED   24025428
REFERENCE   4  (bases 1 to 3188341)
  CONSRTM   Candida Genome Database
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2016) Department of Genetics, Candida Genome
            Database, Stanford University, Mail Stop-5120, Stanford, CA 94305,
            USA
  REMARK    Sequence and annotation update by submitter
REFERENCE   5  (bases 1 to 3188341)
  AUTHORS   Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-OCT-2016) Department of Genetics, Candida Genome
            Database, Stanford University, Mail Stop-5120, Stanford, CA 94305,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method       :: Bowtie v. 1.0
            Assembly Name         :: C_albicans_SC5314_A22
            Long Assembly Name    :: Candida albicans SC5314 Assembly 22
            Genome Coverage       :: 700x
            Sequencing Technology :: Illumina GAIIx
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider :: CGD
            Annotation Status   :: Full annotation
            Annotation Version  :: A22-s07-m01-r01
            URL                 :: http://www.candidagenome.org/
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Candida albicans SC5314"
                     /mol_type="genomic DNA"
                     /strain="SC5314"
                     /host="Homo sapiens"
                     /culture_collection="ATCC:MYA-2876"
                     /db_xref="taxon:237561"
                     /chromosome="1"
                     /haplotype="A"
                     /country="USA: New York"
                     /collected_by="Margarita Silva-Hutner"
     protein         /gene="RPO41"
                     /locus_tag="CAALFM_C100640CA"
                     /note="Putative mitochondrial RNA polymerase; repressed in
                     core stress response; Spider biofilm induced"
                     /transl_table=12
                     /db_xref="CGD:CAL0000185076"
BEGIN
        1 MLSAQRSLVR RITGVRLQVR MLHHTTKTST ATSQIDTTSA GDFKHSEVLS KVMSPLMSIN
       61 HVKEAPSLKN YHNNKITYRS YLNLNPEKYD LDEEEKIVKY YSSKNDGVEV QPYAPEIQYL
      121 KNILESFSEQ KYFDKIDQVL KSLSKLVNAT EFTDICNKYL ENILQDDSLS LQDLNSIIGQ
      181 LQDKCKFKTN TRTEAIILGK MLNDSDNAQS SISEFFGNME KQTIVEILRN MDVIGVDNLY
      241 KVFDCDSIDA SVIPKELQEI YQEHKSKDHD DEIAEDILKL QENKQINPLD KKSLEELLPV
      301 DSFGLQVIRH SLLGLKPDSE AALKFADQVE KIIEDVDDEV LNQDIMSGKI NYFEMYSKLK
      361 TEEQRQAFNE ALNVFNLERQ KQIEIRGIEG AKEKWKHDFE ESQKRGDLNL SKGLNAQCYK
      421 WLQDVLPVLE KEYKLCEALI NGNNSVIEKD DPNAKDRAMY APFILKISPD KAIIITILEL
      481 FKLHSTGGVV RGFRAYKAIQ SVGKAIEAEY RIGLQAKKEN KLFSQKHLSP QLQKLMRRTM
      541 QKGNESTPEW DDATRARIGG VLVSILMSVA KVNVRKETPQ GLIEDFHPAF YHGMQFIAGN
      601 RVGVIKVHTD ISNILSGTSL TESIQPQALP MLVEPKPWNS FYGGGSLYSK TPLVRVKDSP
      661 ETEAYLKAAN ERGNLTGVFE GLNVLGNTAW TVNKKVFNVI SHYWNSGEEF LSIPPVSEEP
      721 QLPQDIPGNS DPQKLLHHTT SKYQALDEYI SNKSQRCDNN YRLEIARAFI GEKLFFPHNL
      781 DFRGRAYPIS PHFNHLGGDL TRSLFLFWDG KELGEEGLNW LKIQLANVYG VDKESLAKRV
      841 EFVNENLEKV LESAADPFAT DAWWQKAEKP WQALSVCFEL AEAYKLDDPT KFVSHLPVHQ
      901 DGTCNGLQHY AALGGDVEGA NQVNLNPSDK PQDVYTYVAK LVETRVKADA EKGDELAIFL
      961 QDKIKRKVVK QTVMTNVYGV TFIGAIEQIR KQIIHLFPKD ADHHAAARYL AVQVFASIRE
     1021 LFENAHFIQA WLTESAKRIT KSVTLDFGES QYSEQELLST VIWTTPLGLP CVQPYRLHKK
     1081 KQLKTAVQDL NIVMPSNTSA VDSRKQQNGF PPNFIHSLDA THMLMTATKC AEFDLNFASV
     1141 HDSFWTHAAD VPQMNRIIRE QFVKLHTTNL IELLKEEFSE RYKDNYQVLP IPNNHELARK
     1201 VKAIKKEWAE ALNRPVQIAD ELYMERKRLQ MLESEDPEEV EVAKNMETTI SITMNYKPYE
     1261 FANRQVSNSF QILVPIQFPE VPSKGEFDVN LVKQSQYFFS
//