LOCUS AOW25762.1 1300 aa PRT PLN 14-OCT-2016 DEFINITION Candida albicans SC5314 DNA-directed RNA polymerase protein. ACCESSION CP017623-58 PROTEIN_ID AOW25762.1 SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 3188341) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 2 (bases 1 to 3188341) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 3188341) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 4 (bases 1 to 3188341) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter REFERENCE 5 (bases 1 to 3188341) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA COMMENT ##Genome-Assembly-Data-START## Assembly Method :: Bowtie v. 1.0 Assembly Name :: C_albicans_SC5314_A22 Long Assembly Name :: Candida albicans SC5314 Assembly 22 Genome Coverage :: 700x Sequencing Technology :: Illumina GAIIx ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Candida albicans SC5314" /mol_type="genomic DNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="1" /haplotype="A" /country="USA: New York" /collected_by="Margarita Silva-Hutner" protein /gene="RPO41" /locus_tag="CAALFM_C100640CA" /note="Putative mitochondrial RNA polymerase; repressed in core stress response; Spider biofilm induced" /transl_table=12 /db_xref="CGD:CAL0000185076" BEGIN 1 MLSAQRSLVR RITGVRLQVR MLHHTTKTST ATSQIDTTSA GDFKHSEVLS KVMSPLMSIN 61 HVKEAPSLKN YHNNKITYRS YLNLNPEKYD LDEEEKIVKY YSSKNDGVEV QPYAPEIQYL 121 KNILESFSEQ KYFDKIDQVL KSLSKLVNAT EFTDICNKYL ENILQDDSLS LQDLNSIIGQ 181 LQDKCKFKTN TRTEAIILGK MLNDSDNAQS SISEFFGNME KQTIVEILRN MDVIGVDNLY 241 KVFDCDSIDA SVIPKELQEI YQEHKSKDHD DEIAEDILKL QENKQINPLD KKSLEELLPV 301 DSFGLQVIRH SLLGLKPDSE AALKFADQVE KIIEDVDDEV LNQDIMSGKI NYFEMYSKLK 361 TEEQRQAFNE ALNVFNLERQ KQIEIRGIEG AKEKWKHDFE ESQKRGDLNL SKGLNAQCYK 421 WLQDVLPVLE KEYKLCEALI NGNNSVIEKD DPNAKDRAMY APFILKISPD KAIIITILEL 481 FKLHSTGGVV RGFRAYKAIQ SVGKAIEAEY RIGLQAKKEN KLFSQKHLSP QLQKLMRRTM 541 QKGNESTPEW DDATRARIGG VLVSILMSVA KVNVRKETPQ GLIEDFHPAF YHGMQFIAGN 601 RVGVIKVHTD ISNILSGTSL TESIQPQALP MLVEPKPWNS FYGGGSLYSK TPLVRVKDSP 661 ETEAYLKAAN ERGNLTGVFE GLNVLGNTAW TVNKKVFNVI SHYWNSGEEF LSIPPVSEEP 721 QLPQDIPGNS DPQKLLHHTT SKYQALDEYI SNKSQRCDNN YRLEIARAFI GEKLFFPHNL 781 DFRGRAYPIS PHFNHLGGDL TRSLFLFWDG KELGEEGLNW LKIQLANVYG VDKESLAKRV 841 EFVNENLEKV LESAADPFAT DAWWQKAEKP WQALSVCFEL AEAYKLDDPT KFVSHLPVHQ 901 DGTCNGLQHY AALGGDVEGA NQVNLNPSDK PQDVYTYVAK LVETRVKADA EKGDELAIFL 961 QDKIKRKVVK QTVMTNVYGV TFIGAIEQIR KQIIHLFPKD ADHHAAARYL AVQVFASIRE 1021 LFENAHFIQA WLTESAKRIT KSVTLDFGES QYSEQELLST VIWTTPLGLP CVQPYRLHKK 1081 KQLKTAVQDL NIVMPSNTSA VDSRKQQNGF PPNFIHSLDA THMLMTATKC AEFDLNFASV 1141 HDSFWTHAAD VPQMNRIIRE QFVKLHTTNL IELLKEEFSE RYKDNYQVLP IPNNHELARK 1201 VKAIKKEWAE ALNRPVQIAD ELYMERKRLQ MLESEDPEEV EVAKNMETTI SITMNYKPYE 1261 FANRQVSNSF QILVPIQFPE VPSKGEFDVN LVKQSQYFFS //