LOCUS ANQ15247.1 417 aa PRT BCT 15-JUL-2016 DEFINITION Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 tyrosine- -tRNA ligase protein. ACCESSION CP016346-1257 PROTEIN_ID ANQ15247.1 SOURCE Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 ORGANISM Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio. REFERENCE 1 (bases 1 to 1927156) AUTHORS Weinstock,M.T., Hesek,E.D., Wilson,C.M. and Gibson,D.G. TITLE Developing Vibrio natriegens as a novel, fast-growing host for biotechnology JOURNAL Unpublished REFERENCE 2 (bases 1 to 1927156) AUTHORS Weinstock,M.T., Fu,L., Schwartz,A.S., Brami,D., Gill,J. and Gibson,D.G. TITLE Direct Submission JOURNAL Submitted (01-JUL-2016) Synthetic Systems & DNA Technologies, Synthetic Genomics, Inc., 11149 North Torrey Pines Rd., La Jolla, CA 92037, USA COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 2 Genome Coverage :: 178.8x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 07/01/2016 12:02:29 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.3 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 4,654 CDS (total) :: 4,484 Genes (coding) :: 4,467 CDS (coding) :: 4,467 Genes (RNA) :: 170 rRNAs :: 13, 12, 12 (5S, 16S, 23S) complete rRNAs :: 13, 12, 12 (5S, 16S, 23S) tRNAs :: 129 ncRNAs :: 4 Pseudo Genes (total) :: 17 Pseudo Genes (ambiguous residues) :: 0 of 17 Pseudo Genes (frameshifted) :: 10 of 17 Pseudo Genes (incomplete) :: 5 of 17 Pseudo Genes (internal stop) :: 3 of 17 Pseudo Genes (multiple problems) :: 1 of 17 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759" /mol_type="genomic DNA" /strain="ATCC 14048" /isolation_source="salt marsh mud" /culture_collection="ATCC:14048" /type_material="type strain of Vibrio natriegens" /db_xref="taxon:1219067" /chromosome="2" /country="USA: Georgia, Sapelo Island" protein /locus_tag="BA890_21295" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_016789017.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MTLIEDLQAR GLIAQASDLE LIQTLLSEPQ TVYCGFDPTA GSLHIGHLVP LIMLKRFQDA 61 GHQAIALIGG ATGMIGDPSF KATERNLNSQ ETVTGWVNDL SKQIQQLMNP QLATPMQLVN 121 NADWMQKINV IDFFRDVGKH FSINTMINRE SVKQRLQRPD QGISFTEFSY ALLQSYDFAE 181 LNRQHGCRLQ IGGNDQWGNI VSGIDLTRRQ NSEQVFGLTL PLITKSDGTK FGKTEGGAVW 241 LDPTKTSPYA FYQFWLAAED ADVYHFLRYY TFLSCEEITA IETQDISSKG KPQAQRILAE 301 EMTRFVHGEA GLASAERITQ ALFSGDVQQL SLSELKQLEL DGLPCIHSTQ QDLVTLLIES 361 GLASSKRIAR ELIDNNAISV NGEKVSSEKP SLSFPLFDQY WLLQRGKKHF CLVTRAV //