LOCUS ANQ15075.1 1808 aa PRT BCT 15-JUL-2016 DEFINITION Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 hypothetical protein protein. ACCESSION CP016346-1073 PROTEIN_ID ANQ15075.1 SOURCE Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 ORGANISM Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio. REFERENCE 1 (bases 1 to 1927156) AUTHORS Weinstock,M.T., Hesek,E.D., Wilson,C.M. and Gibson,D.G. TITLE Developing Vibrio natriegens as a novel, fast-growing host for biotechnology JOURNAL Unpublished REFERENCE 2 (bases 1 to 1927156) AUTHORS Weinstock,M.T., Fu,L., Schwartz,A.S., Brami,D., Gill,J. and Gibson,D.G. TITLE Direct Submission JOURNAL Submitted (01-JUL-2016) Synthetic Systems & DNA Technologies, Synthetic Genomics, Inc., 11149 North Torrey Pines Rd., La Jolla, CA 92037, USA COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 2 Genome Coverage :: 178.8x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 07/01/2016 12:02:29 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.3 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 4,654 CDS (total) :: 4,484 Genes (coding) :: 4,467 CDS (coding) :: 4,467 Genes (RNA) :: 170 rRNAs :: 13, 12, 12 (5S, 16S, 23S) complete rRNAs :: 13, 12, 12 (5S, 16S, 23S) tRNAs :: 129 ncRNAs :: 4 Pseudo Genes (total) :: 17 Pseudo Genes (ambiguous residues) :: 0 of 17 Pseudo Genes (frameshifted) :: 10 of 17 Pseudo Genes (incomplete) :: 5 of 17 Pseudo Genes (internal stop) :: 3 of 17 Pseudo Genes (multiple problems) :: 1 of 17 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759" /mol_type="genomic DNA" /strain="ATCC 14048" /isolation_source="salt marsh mud" /culture_collection="ATCC:14048" /type_material="type strain of Vibrio natriegens" /db_xref="taxon:1219067" /chromosome="2" /country="USA: Georgia, Sapelo Island" protein /locus_tag="BA890_20330" /inference="COORDINATES: ab initio prediction:GeneMarkS+" /note="Derived by automated computational analysis using gene prediction method: GeneMarkS+." /transl_table=11 BEGIN 1 MNSSSRTILI AIIFLCFVAS GCKDSSSSAD EASSVEPQTL LSAEALSNHY VALAFEGPPS 61 ANLEDPSNYE IVDEFGTTLQ VTDGFIDESG SQIILTTTAQ QENNYTLTLK SEDSKLASQS 121 VSAFFVSYAN AAANNSVQFK GSLRPEPALL TAISLSNTQV LLTFSDDMST SVETIEFYRI 181 VAADDSTPEV DVGGLTVLQA TLGSDTSTVI LTTSSQDNIQ YRVKVTNVWS SPEKKRIDPN 241 YTIQNFFGID PIDTTPPVVK GVETTGPTTI VLTFNEAVSD NAGDPSNYTV YYCQVAESPC 301 QEQNRVQLAI TDAVLNQYNT QVLLTTLPQE VGVEYFVVVE GVQDPKGNVV DTTNTANTVT 361 TIYAGESDPA TVLELPRLIG ANSTSNTTVV VSFSKPMSSS VEDPGNYFIV QENVNSEAGT 421 LSIVSAKYLS NDRNSVLLQT RSQNELTYRI TAVNVKDTYG QELDNSFTAG GFLSANTALF 481 AGTPTDNQSL LDSDSDGLTD NDELSGYEVE YITLTGDKVR KQVTSSPDLF DTDGDGISDF 541 EERSYGSDPR NRDTDYDDLS DYQELNEIYT DPFNQDSDGD GLTDGVEFNS FSTSPLFADT 601 DGDQLDDFYE ITVNRNPRIS DLPQLDIEVG NINLQLDYRF DVTKEGSTTR GETESVSTTL 661 TQTRSSEYSK SDSSSHSFDV KLGFQQELGF KATSLVPEWK LSLSQELSTN NSWTSSVSRT 721 SSEASTREYA KSLETNQEVV RGETVTRVVE SASISVPIYI KSTNDIAFTV TNIIVTALVP 781 NEGDPAVLIP IATLVPAADA SLSFSLGPLI PARGPIEFKE DTIYPSVVES LMANPRGVIF 841 KVANYEIQDE NGRRYAFTSQ EVAERTAPLI FDFGGVDLDG DGLSDNPERY RVAVNYGFDV 901 TQDKRVIFDS EGKMLGASFS DVLNNVLGLV QYDEDTNPSE SLTADELFNS YATKLCSYGT 961 IMYRIRGTKA ISASGDKCDV AKGWGVIQPD GSVLPRGDLF PSDLVLKSNR GVRLAYYADE 1021 DKDGLPNRAE YLYGCSAVDP ATDQDTDNDL LDDRFEVLGV RRNSDGIAID ASGEPLLGDE 1081 VWMVQLKTGD SYEARSRCDA LDSDYDGLSD YEEYERKLFK RDELTGEFEL DSDGNLKLER 1141 DFADLLEVNR DSEGNVIGGG RTDPLKQDTD GDGISDSEEV RGYYVELRFP ISQTTTEEKE 1201 PSSCTIPTNG NEYYVLCTSN PLSADTDGDT LNDGDEIRLA GDPTVRDNDD IGDQDFDGVA 1261 NLEEAQGVEV NWELVSTALG FPGIQQSKQA ISSPTSPDTD GDGLSDAQEY YSNPSTHPGK 1321 SDTDGDTVSD YDEVMGSPAN PMAAGGNDVA SEDSEAPGLY VTNPNDADSD DDGLSDGDEL 1381 KGWSVRIVNQ SRTNIYTSDP NAFDSDLDSL PDSLEKQFAT NPIDPNTDGD IFELSDNDEI 1441 LLGTDPLDPQ DICVKFTYVE TVVASDGLDV DNKGKLKGNL NLSLTTIVNG QPQEEKWVIS 1501 ERVVGHDSRW YETGKPVAQG FSAVRLMKYG SYARAWHNAF SYFETASYTN LPNDKDFTMN 1561 TEDFTAEKQI LTGTVSSSYK EIKVNSKVTA AILNNTDIDE NNLEGFCRPK NVTVPDVTNL 1621 DFTTAVSILR ESQFRLGEVS RELSTTVPSG SVISQSPDAG TKKATQTSVD LVISDGAVTV 1681 PDLTGLTYFD ASNLLADSGL EFGDVSPEDA ADQVAARVSS QTPAAGETIS DGGSINVTFT 1741 LATTDVPNLV GLSYNEAITA IENAQLELGT ISPTNADTLA NATVTNQSPT ASSEAILGSA 1801 VNLFFQTN //