LOCUS ANQ14993.1 500 aa PRT BCT 15-JUL-2016 DEFINITION Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 L- arabinose isomerase protein. ACCESSION CP016346-985 PROTEIN_ID ANQ14993.1 SOURCE Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 ORGANISM Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio. REFERENCE 1 (bases 1 to 1927156) AUTHORS Weinstock,M.T., Hesek,E.D., Wilson,C.M. and Gibson,D.G. TITLE Developing Vibrio natriegens as a novel, fast-growing host for biotechnology JOURNAL Unpublished REFERENCE 2 (bases 1 to 1927156) AUTHORS Weinstock,M.T., Fu,L., Schwartz,A.S., Brami,D., Gill,J. and Gibson,D.G. TITLE Direct Submission JOURNAL Submitted (01-JUL-2016) Synthetic Systems & DNA Technologies, Synthetic Genomics, Inc., 11149 North Torrey Pines Rd., La Jolla, CA 92037, USA COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 2 Genome Coverage :: 178.8x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 07/01/2016 12:02:29 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.3 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 4,654 CDS (total) :: 4,484 Genes (coding) :: 4,467 CDS (coding) :: 4,467 Genes (RNA) :: 170 rRNAs :: 13, 12, 12 (5S, 16S, 23S) complete rRNAs :: 13, 12, 12 (5S, 16S, 23S) tRNAs :: 129 ncRNAs :: 4 Pseudo Genes (total) :: 17 Pseudo Genes (ambiguous residues) :: 0 of 17 Pseudo Genes (frameshifted) :: 10 of 17 Pseudo Genes (incomplete) :: 5 of 17 Pseudo Genes (internal stop) :: 3 of 17 Pseudo Genes (multiple problems) :: 1 of 17 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759" /mol_type="genomic DNA" /strain="ATCC 14048" /isolation_source="salt marsh mud" /culture_collection="ATCC:14048" /type_material="type strain of Vibrio natriegens" /db_xref="taxon:1219067" /chromosome="2" /country="USA: Georgia, Sapelo Island" protein /locus_tag="BA890_19890" /inference="EXISTENCE: similar to AA sequence:SwissProt:B8EEN5.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MKDLTNKSVW FITGSQHLYG PKVLEQVAKN SEEIVAGFNQ SDDVCVPVVC KETVKSPEEI 61 LNVCQQANND ENCLGVVLWM HTFSPAKMWI SGLKQLNKPF VHLHTQFSEA LPWESIDMNY 121 MNLNQSAHGD REFGFIGTRL GLDRRVIVGH WQKPSVRKQL DHWCRAAIGW HESHTLRVAR 181 FGDNMRQVAV TEGNKVSAQI EFGFEVHAYG LGELTEVVNK VEDSAINALL EEYRSTYRIA 241 PEIFETPEQL EILKNEARLE LGMETFLQER GCMAFVNTFE NLTGLTNLPG LATQRLMEKG 301 YGYGGEGDWK TAALTRIIKT MGQGLPGGTS FMEDYTYNLT GEGQVLGAHM LEVCPTIAAD 361 KPSIEIHRHT IGKTDDVARA IFSAKSGPAL VATLIDLGNR FRLLVNEIDT VTPPSDLPNL 421 PVAHALWEPQ PNLEVSAASW IHAGGAHHSV YTQNVTLDML EDFAEFAGIE LVVIDKNTTI 481 RDFKTELKHN SLFYRFSSGI //