LOCUS ANQ14950.1 446 aa PRT BCT 15-JUL-2016 DEFINITION Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 omega amino acid--pyruvate aminotransferase protein. ACCESSION CP016346-938 PROTEIN_ID ANQ14950.1 SOURCE Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 ORGANISM Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio. REFERENCE 1 (bases 1 to 1927156) AUTHORS Weinstock,M.T., Hesek,E.D., Wilson,C.M. and Gibson,D.G. TITLE Developing Vibrio natriegens as a novel, fast-growing host for biotechnology JOURNAL Unpublished REFERENCE 2 (bases 1 to 1927156) AUTHORS Weinstock,M.T., Fu,L., Schwartz,A.S., Brami,D., Gill,J. and Gibson,D.G. TITLE Direct Submission JOURNAL Submitted (01-JUL-2016) Synthetic Systems & DNA Technologies, Synthetic Genomics, Inc., 11149 North Torrey Pines Rd., La Jolla, CA 92037, USA COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 2 Genome Coverage :: 178.8x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 07/01/2016 12:02:29 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.3 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 4,654 CDS (total) :: 4,484 Genes (coding) :: 4,467 CDS (coding) :: 4,467 Genes (RNA) :: 170 rRNAs :: 13, 12, 12 (5S, 16S, 23S) complete rRNAs :: 13, 12, 12 (5S, 16S, 23S) tRNAs :: 129 ncRNAs :: 4 Pseudo Genes (total) :: 17 Pseudo Genes (ambiguous residues) :: 0 of 17 Pseudo Genes (frameshifted) :: 10 of 17 Pseudo Genes (incomplete) :: 5 of 17 Pseudo Genes (internal stop) :: 3 of 17 Pseudo Genes (multiple problems) :: 1 of 17 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759" /mol_type="genomic DNA" /strain="ATCC 14048" /isolation_source="salt marsh mud" /culture_collection="ATCC:14048" /type_material="type strain of Vibrio natriegens" /db_xref="taxon:1219067" /chromosome="2" /country="USA: Georgia, Sapelo Island" protein /locus_tag="BA890_19655" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_004424568.1" /note="catalyze the conversion of beta amino acids to the corresponding beta keto acid with pyruvate as the amine acceptor; Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MSNYKFAQDG IDTDLSAHWM AFTSNRSFHQ NPRIITQAQG AWLKDANGRD IYDSLSGLWT 61 CGAGHGRQEI QKAVAEQLGT LDYSPAFQFG HELSFKLADK IVEKMPEGLD HVLFTGSGSE 121 CADTSLKLAR AYWRVKGKAS KTKLIGRARG YHGVNVGGTS LGGIGGNRKT FGQLFDADHI 181 PHTLQPELAF TKGCAETGGV ELANEFLKLI ELHDASNIAA IIVEPMSGSA GVIVPPKGYL 241 QRLREICDQH DILLIFDEVI TAYGRMGCWT GAEYFGVTPD IMNTAKQLTN GAIPMGAVIT 301 SHEIYQAFME QDLPPHMIEF AHGYTYSAHP VACAAGLATL DLLEKDALIQ QSSELAPIFE 361 NKLHAIKGAN HVLDIRNCGL AGAIQIAPRD NDPTIRPFEC TLDLWEKGFY VRSGGDTIQF 421 GPNFNAKAED LERLFDAVYE TLNQLN //