LOCUS ANQ14706.1 815 aa PRT BCT 15-JUL-2016 DEFINITION Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 glycosyl hydrolase protein. ACCESSION CP016346-679 PROTEIN_ID ANQ14706.1 SOURCE Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 ORGANISM Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio. REFERENCE 1 (bases 1 to 1927156) AUTHORS Weinstock,M.T., Hesek,E.D., Wilson,C.M. and Gibson,D.G. TITLE Developing Vibrio natriegens as a novel, fast-growing host for biotechnology JOURNAL Unpublished REFERENCE 2 (bases 1 to 1927156) AUTHORS Weinstock,M.T., Fu,L., Schwartz,A.S., Brami,D., Gill,J. and Gibson,D.G. TITLE Direct Submission JOURNAL Submitted (01-JUL-2016) Synthetic Systems & DNA Technologies, Synthetic Genomics, Inc., 11149 North Torrey Pines Rd., La Jolla, CA 92037, USA COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 2 Genome Coverage :: 178.8x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 07/01/2016 12:02:29 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.3 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 4,654 CDS (total) :: 4,484 Genes (coding) :: 4,467 CDS (coding) :: 4,467 Genes (RNA) :: 170 rRNAs :: 13, 12, 12 (5S, 16S, 23S) complete rRNAs :: 13, 12, 12 (5S, 16S, 23S) tRNAs :: 129 ncRNAs :: 4 Pseudo Genes (total) :: 17 Pseudo Genes (ambiguous residues) :: 0 of 17 Pseudo Genes (frameshifted) :: 10 of 17 Pseudo Genes (incomplete) :: 5 of 17 Pseudo Genes (internal stop) :: 3 of 17 Pseudo Genes (multiple problems) :: 1 of 17 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759" /mol_type="genomic DNA" /strain="ATCC 14048" /isolation_source="salt marsh mud" /culture_collection="ATCC:14048" /type_material="type strain of Vibrio natriegens" /db_xref="taxon:1219067" /chromosome="2" /country="USA: Georgia, Sapelo Island" protein /locus_tag="BA890_18360" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_014234703.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MSDFKTLPKL ITVAVALGLA GTATAANDKD NLQIQDSGVK YTKKAESMLK KLSLSEKLDI 61 LSGPGMDLTT YQGQDAINLD PEKDVTGVAG YINGVKNKKL DIPAVKLADG PAGLRIQPLR 121 DGDSNTYYAT AWPIGSLLAS TWDTELVQKV GQAEGNEVKE YGVDFLLAPG MNIQRNPLLG 181 RNFEYYSEDP VLSGKIAAAM VNGLQSNNIG ATIKHFVANN AETNRFFNNT VADPRTLREI 241 YLRGFQIAVE EAQPWAIMSS YNLVNGTYAN QRKDLMTDIL RDEWGFKGLA MSDWFAGNVS 301 GLRSDFTGQV EGGRDVESAA KQVKAGNDLI EPGGVKTDLL NSYNNGTLTL EEIDNSVVAI 361 LAQMQKTPSY NNYNYSDAPD LDAHAALARQ AAAEGMILLK NTDSALPLAS GSKVASFGTT 421 QVNTLKGGTG SGDVNAAYIV DIASALENKF ELNQGLTSYY SDYFEANKQS TGALIGAFEF 481 CLEPEVDASL QARVDAAAEN DDAAVITIGR QAGEGGDRSA EQGDYRLTNE ELAIINAVST 541 AFHEQGKTVT VVLNVNGLVE TTGWSEKVDS IVLAYMGGQE TGNAVADILS GAVNPSGKLA 601 QTMPVNYADV PSADTFPGAD TDGDGLEDES LYNEGIYVGY RYYSSFDKAP AYPFGYGLSY 661 TNFEYSNPSI VSNTLSKGGA SGSITISTTI TNTGSVAGKE AAQVYVNAPE VKLKKPTIEL 721 KAFNKTDLLN AGQSETLTFK IPAQTLASFD AENNQWIVEP GAYTVYVAPS SDVTGTEAPS 781 VQFTVSSEIV VSQTTPNALA LEEGVTKEDL LTIKE //