LOCUS ANQ14358.1 332 aa PRT BCT 15-JUL-2016 DEFINITION Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 branched- chain amino acid aminotransferase protein. ACCESSION CP016346-309 PROTEIN_ID ANQ14358.1 SOURCE Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 ORGANISM Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio. REFERENCE 1 (bases 1 to 1927156) AUTHORS Weinstock,M.T., Hesek,E.D., Wilson,C.M. and Gibson,D.G. TITLE Developing Vibrio natriegens as a novel, fast-growing host for biotechnology JOURNAL Unpublished REFERENCE 2 (bases 1 to 1927156) AUTHORS Weinstock,M.T., Fu,L., Schwartz,A.S., Brami,D., Gill,J. and Gibson,D.G. TITLE Direct Submission JOURNAL Submitted (01-JUL-2016) Synthetic Systems & DNA Technologies, Synthetic Genomics, Inc., 11149 North Torrey Pines Rd., La Jolla, CA 92037, USA COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ This genome has a base modification file available. ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 2 Genome Coverage :: 178.8x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 07/01/2016 12:02:29 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.3 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 4,654 CDS (total) :: 4,484 Genes (coding) :: 4,467 CDS (coding) :: 4,467 Genes (RNA) :: 170 rRNAs :: 13, 12, 12 (5S, 16S, 23S) complete rRNAs :: 13, 12, 12 (5S, 16S, 23S) tRNAs :: 129 ncRNAs :: 4 Pseudo Genes (total) :: 17 Pseudo Genes (ambiguous residues) :: 0 of 17 Pseudo Genes (frameshifted) :: 10 of 17 Pseudo Genes (incomplete) :: 5 of 17 Pseudo Genes (internal stop) :: 3 of 17 Pseudo Genes (multiple problems) :: 1 of 17 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759" /mol_type="genomic DNA" /strain="ATCC 14048" /isolation_source="salt marsh mud" /culture_collection="ATCC:14048" /type_material="type strain of Vibrio natriegens" /db_xref="taxon:1219067" /chromosome="2" /country="USA: Georgia, Sapelo Island" protein /locus_tag="BA890_16505" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_014234314.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MAAFGTEFMP RMALATFENN QWSDTQIVTS DSISLHPGAH VLHYSSTCFE GLKAFRHEDG 61 SVHVFRMDQN VERFAQSSQL LSLPEIDKEQ VSKMIVDIVS EFSSEVPLPP GSMYIRPTHI 121 GTEAAVGKAA APSISSMLYI LLSPVGDYFS GGAHALRLLL DETGQRCAPH MGMIKSGGNY 181 ASALAPTLEA KSKYQADQVL FCPNGYITET GAANFLLVDG NEIITKALDS SFLHGVTRSS 241 ILTIAKDLGM TVTEREVSVE ELLERAAKPG VEAMLSGTAA VLTSVGTLIH NGQDFKVGTG 301 EAGPAAKKLR QALNDIQWGK APDTHNWLTK IA //