LOCUS ANI06933.1 991 aa PRT BCT 02-JUN-2016 DEFINITION Pseudomonas aeruginosa SJTD-1 peptide synthetase protein. ACCESSION CP015877-85 PROTEIN_ID ANI06933.1 SOURCE Pseudomonas aeruginosa SJTD-1 ORGANISM Pseudomonas aeruginosa SJTD-1 Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 6243825) AUTHORS Liu,H., Liang,R., Tao,F., Ma,C., Liu,Y., Liu,X. and Liu,J. TITLE Genome sequence of Pseudomonas aeruginosa strain SJTD-1, a bacterium capable of degrading long-chain alkanes and crude oil JOURNAL J. Bacteriol. 194 (17), 4783-4784 (2012) PUBMED 22887679 REFERENCE 2 (bases 1 to 6243825) AUTHORS Liang,R., Tao,F., Liu,H. and Liu,J. TITLE Direct Submission JOURNAL Submitted (24-MAY-2012) State Key Laboratory of Microbial Metabolism, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, 800 Dongchuan Rd., Shanghai, Shanghai 200240, China REFERENCE 3 (bases 1 to 6243825) AUTHORS Liang,R. TITLE Direct Submission JOURNAL Submitted (23-MAY-2016) State Key Laboratory of Microbial Metabolism, School of Life Sciences and Biotechnology, Shanghai Jiaotong University, 800 Dongchuan Road, Shanghai, Shanghai 200240, China COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Source bacteria available from Dr. Rubing Liang (School of Life Science and Biotechnology, Shanghai Jiaotong University, Shanghai, 200240, China). ##Genome-Assembly-Data-START## Assembly Method :: ALLPATH-LG v. 2015; GapCloser v. 2015 Reference-guided Assembly :: NC_002516.2 Genome Coverage :: 200x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 05/25/2016 16:12:59 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.2 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 5,696 CDS (total) :: 5,617 Genes (coding) :: 5,603 CDS (coding) :: 5,603 Genes (RNA) :: 79 rRNAs :: 4, 4, 4 (5S, 16S, 23S) complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) tRNAs :: 63 ncRNAs :: 4 Pseudo Genes (total) :: 14 Pseudo Genes (ambiguous residues) :: 0 of 14 Pseudo Genes (frameshifted) :: 5 of 14 Pseudo Genes (incomplete) :: 7 of 14 Pseudo Genes (internal stop) :: 3 of 14 Pseudo Genes (multiple problems) :: 1 of 14 CRISPR Arrays :: 3 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Pseudomonas aeruginosa SJTD-1" /mol_type="genomic DNA" /strain="SJTD-1" /isolation_source="soil" /db_xref="taxon:1193501" /country="China: Shanghai" protein /locus_tag="A214_00425" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_019484729.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MSKDSVLGLF RQHADTHPER PALVDRERSF SYRELDRLSD RLAAHLARRG VARGELLPLL 61 AERSAELVIA ILAAAKCAAA YVPVDRRQPD RRKREILRQC QAPLALATQA EDLPGQPVEA 121 IAQALATSAA GAAPRPALDG SEALYVIFTS GTTGEPKGVV IESRSLANLV SWHNRRFNMD 181 QRSRTTLMAG VGFDVSQWEI WSTLCAGACL HLVPDEVRPD PAALLAFFAE QRISHAFAPT 241 VMVPALAEQP APPSLALRYL FCAGEKLPPV ATGGLPYTVV DYYGPTEATV FATCRIVDAE 301 AHRRPASIGT PIDGCEAFIL DADDRTCHGD RPGELNLAGV CLAREYLRDP DMTARRFHYS 361 QALRRRLYRT GDKARWLADG SLQFLGRLDD QVKIRGHRVE LGDVEAALLR QPAIHGAVVL 421 AHADPRSGSQ QLSAFVVPRQ QDGDARAVLA AIKTALRQEL PDYMLPSRYL SLDSLPTTVN 481 GKIDRQALRR HLDEQCQERL DEQRFGTPGE LQVALSWQEV LGHTDFGLDD SFFEVGGHSL 541 LAAALVRELS RRFGNRAYIH DIYRTPSVRQ LAASLARRAG EAPPALDSEP AQELQRDVRL 601 PADVDFSRPM DTAQLLAPRH ILLTGASGLM GAHLLAELLA SREADLHCPV RAQNDAHALE 661 RLRQAARQHR IELAETDWRR VRAYAADLAE PGFGLPAETY RELAGSVDQV FHSASAVNFI 721 QPYSYMKRDN VEGLGQVLRF CASGRCKPLM LLSSISVYSW GHLHTGKRLM REDDDIDQNL 781 PAVVTDMGYV RSKWVMEKIA DLAAERGLPL MTFRLGYATC HSRTGAYADY QWWSRLARTC 841 LEYRAVPLLR ELREGLTTVD YMVEAISVIA RQPSALGKKF NLVPSIPRCL ILDEFFGRLG 901 RRAGRPLRQM PFDDWVSLWE DNRDAPLYPL LSMFRDNMYA GRSTVELYQD TYLWDCTNVE 961 EHLRGSAVRE PEFDDRLLDL YLAGLGGSAM R //