LOCUS       ANI06933.1               991 aa    PRT              BCT 02-JUN-2016
DEFINITION  Pseudomonas aeruginosa SJTD-1 peptide synthetase protein.
ACCESSION   CP015877-85
PROTEIN_ID  ANI06933.1
SOURCE      Pseudomonas aeruginosa SJTD-1
  ORGANISM  Pseudomonas aeruginosa SJTD-1
            Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
            Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6243825)
  AUTHORS   Liu,H., Liang,R., Tao,F., Ma,C., Liu,Y., Liu,X. and Liu,J.
  TITLE     Genome sequence of Pseudomonas aeruginosa strain SJTD-1, a
            bacterium capable of degrading long-chain alkanes and crude oil
  JOURNAL   J. Bacteriol. 194 (17), 4783-4784 (2012)
   PUBMED   22887679
REFERENCE   2  (bases 1 to 6243825)
  AUTHORS   Liang,R., Tao,F., Liu,H. and Liu,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-MAY-2012) State Key Laboratory of Microbial
            Metabolism, School of Life Sciences and Biotechnology, Shanghai
            Jiao Tong University, 800 Dongchuan Rd., Shanghai, Shanghai 200240,
            China
REFERENCE   3  (bases 1 to 6243825)
  AUTHORS   Liang,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-MAY-2016) State Key Laboratory of Microbial
            Metabolism, School of Life Sciences and Biotechnology, Shanghai
            Jiaotong University, 800 Dongchuan Road, Shanghai, Shanghai 200240,
            China
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            Source bacteria available from Dr. Rubing Liang (School of Life
            Science and Biotechnology, Shanghai Jiaotong University, Shanghai,
            200240, China).
            
            ##Genome-Assembly-Data-START##
            Assembly Method           :: ALLPATH-LG v. 2015; GapCloser v. 2015
            Reference-guided Assembly :: NC_002516.2
            Genome Coverage           :: 200x
            Sequencing Technology     :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 05/25/2016 16:12:59
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 3.2
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 5,696
            CDS (total)                       :: 5,617
            Genes (coding)                    :: 5,603
            CDS (coding)                      :: 5,603
            Genes (RNA)                       :: 79
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 4, 4 (5S, 16S, 23S)
            tRNAs                             :: 63
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 14
            Pseudo Genes (ambiguous residues) :: 0 of 14
            Pseudo Genes (frameshifted)       :: 5 of 14
            Pseudo Genes (incomplete)         :: 7 of 14
            Pseudo Genes (internal stop)      :: 3 of 14
            Pseudo Genes (multiple problems)  :: 1 of 14
            CRISPR Arrays                     :: 3
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Pseudomonas aeruginosa SJTD-1"
                     /mol_type="genomic DNA"
                     /strain="SJTD-1"
                     /isolation_source="soil"
                     /db_xref="taxon:1193501"
                     /country="China: Shanghai"
     protein         /locus_tag="A214_00425"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_019484729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MSKDSVLGLF RQHADTHPER PALVDRERSF SYRELDRLSD RLAAHLARRG VARGELLPLL
       61 AERSAELVIA ILAAAKCAAA YVPVDRRQPD RRKREILRQC QAPLALATQA EDLPGQPVEA
      121 IAQALATSAA GAAPRPALDG SEALYVIFTS GTTGEPKGVV IESRSLANLV SWHNRRFNMD
      181 QRSRTTLMAG VGFDVSQWEI WSTLCAGACL HLVPDEVRPD PAALLAFFAE QRISHAFAPT
      241 VMVPALAEQP APPSLALRYL FCAGEKLPPV ATGGLPYTVV DYYGPTEATV FATCRIVDAE
      301 AHRRPASIGT PIDGCEAFIL DADDRTCHGD RPGELNLAGV CLAREYLRDP DMTARRFHYS
      361 QALRRRLYRT GDKARWLADG SLQFLGRLDD QVKIRGHRVE LGDVEAALLR QPAIHGAVVL
      421 AHADPRSGSQ QLSAFVVPRQ QDGDARAVLA AIKTALRQEL PDYMLPSRYL SLDSLPTTVN
      481 GKIDRQALRR HLDEQCQERL DEQRFGTPGE LQVALSWQEV LGHTDFGLDD SFFEVGGHSL
      541 LAAALVRELS RRFGNRAYIH DIYRTPSVRQ LAASLARRAG EAPPALDSEP AQELQRDVRL
      601 PADVDFSRPM DTAQLLAPRH ILLTGASGLM GAHLLAELLA SREADLHCPV RAQNDAHALE
      661 RLRQAARQHR IELAETDWRR VRAYAADLAE PGFGLPAETY RELAGSVDQV FHSASAVNFI
      721 QPYSYMKRDN VEGLGQVLRF CASGRCKPLM LLSSISVYSW GHLHTGKRLM REDDDIDQNL
      781 PAVVTDMGYV RSKWVMEKIA DLAAERGLPL MTFRLGYATC HSRTGAYADY QWWSRLARTC
      841 LEYRAVPLLR ELREGLTTVD YMVEAISVIA RQPSALGKKF NLVPSIPRCL ILDEFFGRLG
      901 RRAGRPLRQM PFDDWVSLWE DNRDAPLYPL LSMFRDNMYA GRSTVELYQD TYLWDCTNVE
      961 EHLRGSAVRE PEFDDRLLDL YLAGLGGSAM R
//