LOCUS AMU92919.1 555 aa PRT BCT 21-JUN-2016 DEFINITION Sphingopyxis macrogoltabida transposase protein. ACCESSION CP013346-54 PROTEIN_ID AMU92919.1 SOURCE Sphingopyxis macrogoltabida (Sphingomonas macrogoltabidus) ORGANISM Sphingopyxis macrogoltabida Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 151240) AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete Genome Sequence of Sphingopyxis macrogoltabida Strain 203N (NBRC 111659), a Polyethylene Glycol Degrader JOURNAL Genome Announc 4 (3) (2016) PUBMED 27284142 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 151240) AUTHORS Yoshiyuki,O. TITLE Direct Submission JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. ##Genome-Assembly-Data-START## Assembly Method :: newbler v. 3.0 Genome Coverage :: 60x Sequencing Technology :: Illumina MiSeq and PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/30/2015 14:58:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 5,691 CDS :: 5,518 Pseudo Genes :: 111 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 58 ncRNAs :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis macrogoltabida" /mol_type="genomic DNA" /strain="203N" /isolation_source="activated sludge" /culture_collection="NBRC:111659" /db_xref="taxon:33050" /plasmid="unnamed2" /country="Japan: Kyoto" /collection_date="1974" protein /locus_tag="ATM17_40280" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_020485769.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MAEAASDLSL VPGPSWQEAE RRAAVLRPLA ALPACPREQV RAAAVVLGVS ERQVYRLLRK 61 CREGGGTVTT LVSSGSDGGR GKRRIEERRE ALIRDAVAEL YLTPQRLSAE KIVVEVRRRA 121 RDQHVRPPSA STVRRRIAAL SQEERRRRGD VAVPEAVLGS TVTAQAPLDV VQIDHTPVDL 181 ILVDPIERRP IGRPWVTVAI DVFSRCIAGL LVTLEAPSAT SVGLCLAHVA SDKRSWLTAI 241 GVDADWPVMG RPRQIGVDNA AEFHSEALER GCAQHDITID WRPFGRPQVG GVVERVIGTL 301 MELVHGLPGT TFSNVMQRGR YDSDKAACLT LAELERWLAV AIAKLYHLRP HAGLDGEAPL 361 QRYQEGVRAL ATEGLAPPSP RDPRAFLIDF LPVVRRTLRR DGVVIDHIHY FSDALKPWIE 421 RDGPPRRILI RRDPRDLSRI YVHDPDDGGY LEVGYRELSR PPVSLWEHRL ARSRLRRQRQ 481 SEIDEGILFA GIEEMREIEV QARTATRTTR RNQARRLGLR VITDPAPRLS EPASPWPVRA 541 VDGTASSEPF DVEEW //