LOCUS AMU92666.1 770 aa PRT BCT 21-JUN-2016 DEFINITION Sphingopyxis macrogoltabida hypothetical protein protein. ACCESSION CP013345-172 PROTEIN_ID AMU92666.1 SOURCE Sphingopyxis macrogoltabida (Sphingomonas macrogoltabidus) ORGANISM Sphingopyxis macrogoltabida Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 421025) AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete Genome Sequence of Sphingopyxis macrogoltabida Strain 203N (NBRC 111659), a Polyethylene Glycol Degrader JOURNAL Genome Announc 4 (3) (2016) PUBMED 27284142 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 421025) AUTHORS Yoshiyuki,O. TITLE Direct Submission JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. ##Genome-Assembly-Data-START## Assembly Method :: newbler v. 3.0 Genome Coverage :: 60x Sequencing Technology :: Illumina MiSeq and PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/30/2015 14:58:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 5,691 CDS :: 5,518 Pseudo Genes :: 111 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 58 ncRNAs :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis macrogoltabida" /mol_type="genomic DNA" /strain="203N" /isolation_source="activated sludge" /culture_collection="NBRC:111659" /db_xref="taxon:33050" /plasmid="unnamed1" /country="Japan: Kyoto" /collection_date="1974" protein /locus_tag="ATM17_30885" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_011493754.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MALAKTNAER VQMGEGILSG VRVVEIDGGQ ALSVAGLLLA EAGAEVIKVE ADRGARGAAS 61 FAVWNRSKKS VHLDIGTAGG RASLDRLLRA ADVLMTDWPA DRQNRARLDE ASLADLYPHL 121 IHTAIGGWPA NHRLANRPVD DTIVLAESGL MDEQRGVRDG PIYLRFPLGS WGAAYLAAIG 181 VVSRLIQAGR GGGAGPVSTS LVQGALLPTA MLWRRAEFAS SALVDSMNKE MRSPQFECGD 241 GVWIHVKAPP DDAPLMRAAL AGLGPNRIAE LNRGWPSNHT CINWGANAHI FKTRPSAEWL 301 ADLWGADVPV QADVPMGAIY RDEQALANGY VVDVEDPELG KTRQPGVPCT VDPPMRVRSA 361 APGLGTTPIT VWDDAPTPDR KWVDDSLPLA GVRIADFGSF VAGPLAPMIL GDLGADVIKI 421 EGTGGDVMRR VEGAFLGAHR GKRSLALDLK SPAAAKVVER LVRWADIVHH NIRMPAAWRI 481 GLANDQVMAI SPDVIFCHVS SYGPVGPRKD WPGYDQLFQA QSGWEYEGAG EGNPPMWHRF 541 GMMDHQAGLA SALSMLLALY HRDRTGQRQA AAGSLLGASV MTVSEMVMLD DGALSPVPRL 601 DSRQMGVDPG RRLYAVKDGW VALVAEQDGA LSRLCDLAGA DHVAGLEESL ADVDMESVIA 661 MAAAAGGCAV VAHRDHCNAF FDDPDNRRLG LVQIYRHARL GRLELPGAFL HFGPRPAIGD 721 LPPPDVGEHS RPVMSEIGVT AEEAEELIAA GAVHDGGHGA GAMVFRSTAV //