LOCUS AMU92649.1 832 aa PRT BCT 21-JUN-2016 DEFINITION Sphingopyxis macrogoltabida hypothetical protein protein. ACCESSION CP013345-155 PROTEIN_ID AMU92649.1 SOURCE Sphingopyxis macrogoltabida (Sphingomonas macrogoltabidus) ORGANISM Sphingopyxis macrogoltabida Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 421025) AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete Genome Sequence of Sphingopyxis macrogoltabida Strain 203N (NBRC 111659), a Polyethylene Glycol Degrader JOURNAL Genome Announc 4 (3) (2016) PUBMED 27284142 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 421025) AUTHORS Yoshiyuki,O. TITLE Direct Submission JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. ##Genome-Assembly-Data-START## Assembly Method :: newbler v. 3.0 Genome Coverage :: 60x Sequencing Technology :: Illumina MiSeq and PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/30/2015 14:58:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 5,691 CDS :: 5,518 Pseudo Genes :: 111 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 58 ncRNAs :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis macrogoltabida" /mol_type="genomic DNA" /strain="203N" /isolation_source="activated sludge" /culture_collection="NBRC:111659" /db_xref="taxon:33050" /plasmid="unnamed1" /country="Japan: Kyoto" /collection_date="1974" protein /locus_tag="ATM17_30800" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_015459434.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MASPIQIVLN PDNFQEAREK GGGGGHKDFF AHRDKEFAAH KTSLLQQIET ISVELAAQAT 61 GSVGYAKVIL RREAWAKSHR PMTALFRPDR TRLVGGADLG VMIVEARPRS LAEVAKQIEE 121 AETETILRFD ETKNKDVPYP SARKSEVGAI DRIELFRASD KRNFSVEEAV AWLSNPMTGG 181 SYQVELFTPP APRADWDRLD EANRTLLETF VAGFSTLGQG VSVARMSSGS GSQPLLSVRL 241 DETSTPVLRM NDTPSNERKR ALAPFAHDIE SHIRLLEFLD NHPLVRRIEL PGIVVRANAA 301 TENRTRPSAA TINARDLRRS YPKLGVVDGG ISPALDEWII DRWTVLADED SNHAHGTFIG 361 GLATIGASLN GPEICSEADG AELVDIAIFP SPEKAGAFAS YYPDGVPQFF DEMEAAVADA 421 HARHGVRVFN MSLNILQPAV ADRYSAHAVR LDGIAEANNA VIFVSAGNTQ PQDLRPEWPA 481 DASRALADLA LARNDGLLTP AESARNVTIA ALNPTGHDGC VPYAPTRYSR RGPGLRGSMK 541 PDLAHVGGAG TQHTTLGHGL FSILPDGAIV DGCGTSYAAP IAAKTAAVIE HLIEGEVSRE 601 TIIGMLVHHA RLPEPLRDKT LSPVARHLVG FGMPPSAETI LETGDHSITL VFASRIKPGE 661 QINFGFSWPA SLVETGGKCR GAAKLTLVST PPLDARFGAE YVRVNINAVL QQEQAPDKWK 721 GRLEPVYLPD KRDRHAIEAE LIEHDLKWSP VKVHAKNFPK GVGPSSNWRL FVEYLTRAGE 781 EMPEEGVPFT AVLTISDPTD DKPVFNEMRQ NLQAIGAQIT DIRTAARITP RV //