LOCUS AMU92578.1 728 aa PRT BCT 21-JUN-2016 DEFINITION Sphingopyxis macrogoltabida hypothetical protein protein. ACCESSION CP013345-83 PROTEIN_ID AMU92578.1 SOURCE Sphingopyxis macrogoltabida (Sphingomonas macrogoltabidus) ORGANISM Sphingopyxis macrogoltabida Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 421025) AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete Genome Sequence of Sphingopyxis macrogoltabida Strain 203N (NBRC 111659), a Polyethylene Glycol Degrader JOURNAL Genome Announc 4 (3) (2016) PUBMED 27284142 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 421025) AUTHORS Yoshiyuki,O. TITLE Direct Submission JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. ##Genome-Assembly-Data-START## Assembly Method :: newbler v. 3.0 Genome Coverage :: 60x Sequencing Technology :: Illumina MiSeq and PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/30/2015 14:58:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 5,691 CDS :: 5,518 Pseudo Genes :: 111 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 58 ncRNAs :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis macrogoltabida" /mol_type="genomic DNA" /strain="203N" /isolation_source="activated sludge" /culture_collection="NBRC:111659" /db_xref="taxon:33050" /plasmid="unnamed1" /country="Japan: Kyoto" /collection_date="1974" protein /locus_tag="ATM17_30425" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_016828307.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology.; Start codon location was manually corrected by using GenomeMatcher" /transl_table=11 BEGIN 1 MPTTEYTFCR NCTAQCGLEV TIEDNRLLSV TGDKNQPLTK GYFCPKALAS NDIHNGEDRL 61 FEHRKGRGAA QTGVEAQPAF DEIGERLRHI IDEHGPRAVG LYFGTGANMN AMAHSAFRAF 121 MHALGSPYIF SSMTLDQSAK WVNISRMGMF APGPRYIHDA DVGLMVGSNT VLTHAAVRGV 181 PAANPRKWLK QGKENGLKLI VVDPRLTETA RLADLHLQIR PGEDIWLFGG MIRLVLDNGW 241 ENREFCDRWI GSLDALREAV REFDLDRVAE RTGLPSSQIE EATKLFATAA RPSAATGTGP 301 NMSPRSNLAE HLVMVLNAIC AGYRRAGDPV TNTGYLFGPN EVQERIIPPN RSWECEPKLR 361 SRDTGRIFGE FPTALLPDEI IGKGEDRLRA LIVVGGNPAM ALVDPGKSLA AFDALELLVT 421 LDVRSTETTA ISDYVISTSL PYEHDDITGM FDGYNPIAYA NVVRGFMERP HGIVDDWEFF 481 WEIARRLGLQ LELKRPQYPA AYETVVGPTL ALDMTAKPEV ATILRFYAST FGRTDYDELV 541 AAPHGVRRDD LVNRVLPASQ DDGFRLDLLP PDVARELAEA IAEPRSEAFK YRLTTRRLLY 601 TVNSAYRHAG RTRKRFPTNP ASMNPSDMAA EGLETDDWIR ITSAHGSVVA RVEADPTIRS 661 GAISLSHLWG KLRQEDDPDG RTGAFSGHLS SLDIAELESI NFMPIQSAVP INIALHSKAD 721 SGCDDARV //