LOCUS AMU92529.1 927 aa PRT BCT 21-JUN-2016 DEFINITION Sphingopyxis macrogoltabida conjugal transfer protein TraG protein. ACCESSION CP013345-34 PROTEIN_ID AMU92529.1 SOURCE Sphingopyxis macrogoltabida (Sphingomonas macrogoltabidus) ORGANISM Sphingopyxis macrogoltabida Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 421025) AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete Genome Sequence of Sphingopyxis macrogoltabida Strain 203N (NBRC 111659), a Polyethylene Glycol Degrader JOURNAL Genome Announc 4 (3) (2016) PUBMED 27284142 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 421025) AUTHORS Yoshiyuki,O. TITLE Direct Submission JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. ##Genome-Assembly-Data-START## Assembly Method :: newbler v. 3.0 Genome Coverage :: 60x Sequencing Technology :: Illumina MiSeq and PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/30/2015 14:58:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 5,691 CDS :: 5,518 Pseudo Genes :: 111 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 58 ncRNAs :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis macrogoltabida" /mol_type="genomic DNA" /strain="203N" /isolation_source="activated sludge" /culture_collection="NBRC:111659" /db_xref="taxon:33050" /plasmid="unnamed1" /country="Japan: Kyoto" /collection_date="1974" protein /locus_tag="ATM17_30180" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_015449387.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MLEVFTVGGG EYLVNTFNAV AAWSGGGGYK SLIRVVMVMG LIYSLLVVTF TLNYRAWLNW 61 FLQATAIYLC LMVPTVDIKV TDRINPALAP ATVDNVPMGL GILASLTTQI GDWLTRTAET 121 VFVMPNELNY SSNGMVYGAR LYDATRNFVV RDAEFSTNLE NHFKNCLFGD VMLYQKSLTE 181 LAKATDLWAA VGPGSEARSQ QWLERQGNGT VQSYILTCRQ AYQALDAQWG PMIEANAPLW 241 GREAYPRLSN ALAADKLKHD VPIVSAAFTG AGGSFAEVMR QNTAINAFTA ARNSMSGSTG 301 AAAIDTFAQT RADIQARNTY GSIAQQAMAW VPILNIVLTV VFFAMFPVIF PLFLMPQTGV 361 PALKGYVTGF FYLAAWGPLY VILHMICMTR ATSAANGVAG GGVTLGSYAG IGAVNAETAT 421 IAGFMLMSVP FLAAGLARGA MSIAGHSMSM LAPAQNAAEA AALEQTTGNY SYGNVSWANS 481 TANMRQADQW TTAPSYMGGA PSVGWRQDNG AMISGFGNGQ EVFDTGAAIS HLGFSPTLTS 541 GFVSERRELA SWAHRQAQAY ENAAAEVLTA THANRSTVGT STERSSGWDA GSGWQSQSGI 601 EQFDRRSTSS SEGTGESTNI TQRKGITQGH DRQAQISDQV SGSISAALGG GGRGGRITSG 661 IGGSVTKSGT QSDSLGHGTS ETRSIDSGSS SSSGVNSEHG NGSNAMISDS QYERGGTFSR 721 ASVTSSSSQS TDDSLALAKS YSEQARRLEE LSQQLSRDAS YAETHGMQLS ENLSQDLAQW 781 YRQQQVNNPG LDAPELWATD LSAQPRAVRN EMIGRWMSES QQSIRAEIAE SLHTPDMVNV 841 HRPAIDSAED VRAAYHPRGV GGLPAAPGRR DPNPASRIIE EGRSELEGRK ATGQAMRGQY 901 VEGASDLGQE IGRDHNRGFF QDPKLRE //