LOCUS AMU92518.1 862 aa PRT BCT 21-JUN-2016 DEFINITION Sphingopyxis macrogoltabida (4Fe-4S)-binding protein protein. ACCESSION CP013345-23 PROTEIN_ID AMU92518.1 SOURCE Sphingopyxis macrogoltabida (Sphingomonas macrogoltabidus) ORGANISM Sphingopyxis macrogoltabida Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 421025) AUTHORS Ohtsubo,Y., Nonoyama,S., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete Genome Sequence of Sphingopyxis macrogoltabida Strain 203N (NBRC 111659), a Polyethylene Glycol Degrader JOURNAL Genome Announc 4 (3) (2016) PUBMED 27284142 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 421025) AUTHORS Yoshiyuki,O. TITLE Direct Submission JOURNAL Submitted (30-NOV-2015) Department of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. ##Genome-Assembly-Data-START## Assembly Method :: newbler v. 3.0 Genome Coverage :: 60x Sequencing Technology :: Illumina MiSeq and PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/30/2015 14:58:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 5,691 CDS :: 5,518 Pseudo Genes :: 111 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 58 ncRNAs :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis macrogoltabida" /mol_type="genomic DNA" /strain="203N" /isolation_source="activated sludge" /culture_collection="NBRC:111659" /db_xref="taxon:33050" /plasmid="unnamed1" /country="Japan: Kyoto" /collection_date="1974" protein /locus_tag="ATM17_30125" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_020818502.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MADRGLFERL VAGILGDTAR PDAERPRLGV PMLADWLPYR SHDPKTGIFY NSASRGFVIE 61 ASPLIGANER TGEILTQFLS EAIPTPGCLQ FHQWMSPRIG ERLSRWYLPR YAARGVYERM 121 AKHRVDFLTA GVWQSLSSDA PFSLRNHRVA ISYSTPESSS VTSEEIVAVM EGLISALASI 181 NVSARTMEPA DLIAWIDDIT SPTTAAGEDV VNYNPFDPIA DQAIRRDVEF RIEADRMLLR 241 TERFRPTGKT VDEAPEIGEI LPDIFDVRSF SVRNLPTRWA PWDVARLIGD MFTDKLRMPC 301 PVSTNLCIEF PDSQALSNKA SFKFMRTTSL ADSKSARFLP QLREQSQEWR FVNDEVRQGR 361 KLVRVFFSVT SFSPKGRGDA NERVLKSVYR AAGWDLLDDR YLQVMGLLCA MPMTMANGLA 421 RDLDRMKRLR TLLTTTAANL APIQGEYLGG PVPHLMLIGR RGQPFFWSPF ENAAGNHNVA 481 VVGKSGSGKS VTLQELCASL CGAGARVVVI DDGRSFEHSA KLQGGAFVEF TIASGFCLNP 541 FSMIDEELAN GNEDYLLDCM SMLKAIVSQM ARHIDRLNDT ERGLIDGAVN SVWQAKGRIG 601 AIDDVIAALE ATGNALAMDL GIAMRPFSSG GTYGRFFEGE ASFELSAQFT VFELSDLSSR 661 EELRSVVLTA IMFMSQQMMR KVDRSIPKAL LLDEAWQMLR GGATADFIET YARTCRKYGG 721 ALVTATQSLN DYYKSPGSIA ALENSDWFVI LEQKPETIAD FKNHDRFEMD DYTDALLRSL 781 KINGREYSDI LIKGPEMLAV GRLVLDPFSA TVYSSSPAVY AAIEALVAQG LGMDEAIERV 841 AFPAAHGRGA APRDPDFAEA AE //