LOCUS ALR18511.1 666 aa PRT BCT 03-DEC-2015 DEFINITION Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 exoribonuclease II protein. ACCESSION CP009978-1296 PROTEIN_ID ALR18511.1 SOURCE Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 ORGANISM Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio. REFERENCE 1 (bases 1 to 1927130) AUTHORS Lee,H. and Church,G.M. TITLE Vibrio natriegens genome v1.0 JOURNAL Unpublished REFERENCE 2 (bases 1 to 1927130) AUTHORS Lee,H. and Church,G.M. TITLE Direct Submission JOURNAL Submitted (21-NOV-2014) Genetics, Harvard Medical School, 77 Avenue Louis Pasteur, NRB 233, Boston, MA 02115, USA COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: RS HGAP v. 3 Assembly Name :: Vnat1.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 96.48x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/24/2014 10:39:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 2.9 (rev. 452286) Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 4,665 CDS :: 4,459 Pseudo Genes :: 42 rRNAs :: 34 (5S, 16S, 23S) tRNAs :: 129 ncRNA :: 1 Frameshifted Genes :: 10 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759" /mol_type="genomic DNA" /strain="ATCC 14048" /isolation_source="salt marsh mud" /culture_collection="ATCC:14048" /type_material="type strain of Vibrio natriegens" /db_xref="taxon:1219067" /chromosome="2" /country="USA" /collection_date="27-Feb-2012" protein /locus_tag="PN96_21590" /EC_number="3.1.13.1" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_014234497.1" /note="Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction; Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MFQDNPLLAQ LKQQIQENLP KKEGSIKATD KGFGFLEVDS KTSFFIPPAY MKKCIHGDKV 61 VAIIRTENER EVAEPQELLE QSLTRFIGRV KMFKGKLNVV PDHPQLKKLS LKAKLKKGQK 121 PDNFNEGDWV VGHLIRHPLK GDNSFFVEIS EKITDADDKI APWWVTLAQN DLPNSEPAGI 181 ENWELKDDAE LDRVDLTHVP FVTIDGESTK DMDDALHAKK TESGDFELTI AIADPTAYIT 241 PEDEMDKVAR ERGYTIYLPG RNIPMLPRDL ADDLCSLIEG ETRPALCCTV SVSKDGVIGD 301 NINFFAANIK SHARLAYDHV SDWIENGSSD KWQPSEDIAT IVRDLYDFSV ARADWREKNA 361 VVFPDRPDYR FELSEDNDVI AIHADMRRSA NRLVEESMIT ANICAGRTLR DKFETGVFNT 421 HSGLKAEKIE EVVQLVDPEG THGFTADTIA TLEGFAALRR WLSTQETSYL DNRIRKFQAY 481 SEVGNQPLPH YAMGLDIYAT WTSPIRKYGD MINHRMLKAV ILDKEPVQKP DDQVGEELAL 541 HRKHHKIAER NVSDWLYART LAEEPSKQTR YIGEIFDINR AGARVRLLEN GAAAFIPGSL 601 IVDNKERIEC NGDNGTISID KEVVYKLGDT LEVVLADVNQ ENRSLVAKPT QVFAEPPKAQ 661 TEQTVE //