LOCUS       ALR18511.1               666 aa    PRT              BCT 03-DEC-2015
DEFINITION  Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 exoribonuclease 
            II protein.
ACCESSION   CP009978-1296
PROTEIN_ID  ALR18511.1
SOURCE      Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759
  ORGANISM  Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759
            Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;
            Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 1927130)
  AUTHORS   Lee,H. and Church,G.M.
  TITLE     Vibrio natriegens genome v1.0
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1927130)
  AUTHORS   Lee,H. and Church,G.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-NOV-2014) Genetics, Harvard Medical School, 77 Avenue
            Louis Pasteur, NRB 233, Boston, MA 02115, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: RS HGAP v. 3
            Assembly Name          :: Vnat1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 96.48x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/24/2014 10:39:19
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 2.9 (rev. 452286)
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 4,665
            CDS                          :: 4,459
            Pseudo Genes                 :: 42
            rRNAs                        :: 34 (5S, 16S, 23S)
            tRNAs                        :: 129
            ncRNA                        :: 1
            Frameshifted Genes           :: 10
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM
                     759"
                     /mol_type="genomic DNA"
                     /strain="ATCC 14048"
                     /isolation_source="salt marsh mud"
                     /culture_collection="ATCC:14048"
                     /type_material="type strain of Vibrio natriegens"
                     /db_xref="taxon:1219067"
                     /chromosome="2"
                     /country="USA"
                     /collection_date="27-Feb-2012"
     protein         /locus_tag="PN96_21590"
                     /EC_number="3.1.13.1"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_014234497.1"
                     /note="Involved in mRNA degradation. Hydrolyzes
                     single-stranded polyribonucleotides processively in the 3'
                     to 5' direction; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MFQDNPLLAQ LKQQIQENLP KKEGSIKATD KGFGFLEVDS KTSFFIPPAY MKKCIHGDKV
       61 VAIIRTENER EVAEPQELLE QSLTRFIGRV KMFKGKLNVV PDHPQLKKLS LKAKLKKGQK
      121 PDNFNEGDWV VGHLIRHPLK GDNSFFVEIS EKITDADDKI APWWVTLAQN DLPNSEPAGI
      181 ENWELKDDAE LDRVDLTHVP FVTIDGESTK DMDDALHAKK TESGDFELTI AIADPTAYIT
      241 PEDEMDKVAR ERGYTIYLPG RNIPMLPRDL ADDLCSLIEG ETRPALCCTV SVSKDGVIGD
      301 NINFFAANIK SHARLAYDHV SDWIENGSSD KWQPSEDIAT IVRDLYDFSV ARADWREKNA
      361 VVFPDRPDYR FELSEDNDVI AIHADMRRSA NRLVEESMIT ANICAGRTLR DKFETGVFNT
      421 HSGLKAEKIE EVVQLVDPEG THGFTADTIA TLEGFAALRR WLSTQETSYL DNRIRKFQAY
      481 SEVGNQPLPH YAMGLDIYAT WTSPIRKYGD MINHRMLKAV ILDKEPVQKP DDQVGEELAL
      541 HRKHHKIAER NVSDWLYART LAEEPSKQTR YIGEIFDINR AGARVRLLEN GAAAFIPGSL
      601 IVDNKERIEC NGDNGTISID KEVVYKLGDT LEVVLADVNQ ENRSLVAKPT QVFAEPPKAQ
      661 TEQTVE
//