LOCUS       ALR17177.1               822 aa    PRT              BCT 02-SEP-2016
DEFINITION  Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 ATP-
            dependent helicase HrpB protein.
ACCESSION   CP009977-229
PROTEIN_ID  ALR17177.1
SOURCE      Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759
  ORGANISM  Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759
            Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;
            Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 3248023)
  AUTHORS   Lee,H. and Church,G.M.
  TITLE     Vibrio natriegens genome v1.0
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3248023)
  AUTHORS   Lee,H. and Church,G.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-NOV-2014) Genetics, Harvard Medical School, 77 Avenue
            Louis Pasteur, NRB 233, Boston, MA 02115, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: RS HGAP v. 3
            Assembly Name          :: Vnat1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 96.48x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/24/2014 10:39:19
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 2.9 (rev. 452286)
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 4,665
            CDS                          :: 4,459
            Pseudo Genes                 :: 42
            rRNAs                        :: 34 (5S, 16S, 23S)
            tRNAs                        :: 129
            ncRNA                        :: 1
            Frameshifted Genes           :: 10
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM
                     759"
                     /mol_type="genomic DNA"
                     /strain="ATCC 14048"
                     /isolation_source="salt marsh mud"
                     /culture_collection="ATCC:14048"
                     /type_material="type strain of Vibrio natriegens"
                     /db_xref="taxon:1219067"
                     /chromosome="1"
                     /country="USA"
                     /collection_date="27-Feb-2012"
     protein         /locus_tag="PN96_01415"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_020333933.1"
                     /note="similar in sequence to the ATP-dependent RNA
                     helicase HrpA; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MSQLPIEAVM PQLLAAVKNQ HQVILKAAPG AGKSTYFPLQ LIKHQLVTGK IIMLEPRRLA
       61 ARNIARYLSE QLGEQVGQSV GYRVRGETKV SAATQLEIVT EGIMTRMIQN DPELDGVDLL
      121 IFDEFHERSI HADTALAFSL EVQEALRDDL KLVVMSATLD QDALQVLLPE ASFIESEGRS
      181 FDVETRYVPL AANDHLPVVM AKTIESLMNK ESGSLLAFLP GVAAIKQVEE RLSHLPTEVE
      241 VCPLYGQLSF AEQQKAISPA VKGKRKVVLA TNIAETSLTI EGIRLVVDSG LERIARFDLK
      301 NGLTRLEQVR IAQSSAIQRL GRAGRIEEGI CVRLYSESQF KQQPTVPQPE ILHSDLASLV
      361 MELAFWGASD IQDLKWLNIP SQAALSQAKQ LLVSLGLLTE QGQLTANGRQ AHELGVEPRA
      421 AAMLIKSSQH SEKMLNTALA AVALIEEPER NVTNIAHSLH RWVTGTHPKR SLLLKRAQSL
      481 SHKLDGAFSV ADVDESALPL VLSLAFPDRI AQQRSNQYGR FTLSNGHGAE CRPDDTLGAS
      541 EYLVAVDLMR SHSNSSQIHL ACELDVNLLQ TTFKSLFSSE ELVDWDEKRG RLIAQRQQKL
      601 GQLVIESESL PSPGKEKMTQ ALLTYVRRQG LSSLNWSPTA ESLIERIRCA IDWLPEQPWP
      661 SFDNESLLES LEEWLEPYMA SVSSVKDLNK VNLTEALNAR LGWPLNQNID EWLPEHYQLP
      721 TGTKKCIRYQ YGHEPVLSVR MQEVFGESTS PTVALGRKPL VLELLSPAQR PLQVTTDLAA
      781 FWKGSYKDVQ KEMKGRYPKH VWPDDPASHV ATTKTKRQLN ND
//