LOCUS ALR17177.1 822 aa PRT BCT 02-SEP-2016 DEFINITION Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 ATP- dependent helicase HrpB protein. ACCESSION CP009977-229 PROTEIN_ID ALR17177.1 SOURCE Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 ORGANISM Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio. REFERENCE 1 (bases 1 to 3248023) AUTHORS Lee,H. and Church,G.M. TITLE Vibrio natriegens genome v1.0 JOURNAL Unpublished REFERENCE 2 (bases 1 to 3248023) AUTHORS Lee,H. and Church,G.M. TITLE Direct Submission JOURNAL Submitted (21-NOV-2014) Genetics, Harvard Medical School, 77 Avenue Louis Pasteur, NRB 233, Boston, MA 02115, USA COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: RS HGAP v. 3 Assembly Name :: Vnat1.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 96.48x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/24/2014 10:39:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 2.9 (rev. 452286) Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 4,665 CDS :: 4,459 Pseudo Genes :: 42 rRNAs :: 34 (5S, 16S, 23S) tRNAs :: 129 ncRNA :: 1 Frameshifted Genes :: 10 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759" /mol_type="genomic DNA" /strain="ATCC 14048" /isolation_source="salt marsh mud" /culture_collection="ATCC:14048" /type_material="type strain of Vibrio natriegens" /db_xref="taxon:1219067" /chromosome="1" /country="USA" /collection_date="27-Feb-2012" protein /locus_tag="PN96_01415" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_020333933.1" /note="similar in sequence to the ATP-dependent RNA helicase HrpA; Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MSQLPIEAVM PQLLAAVKNQ HQVILKAAPG AGKSTYFPLQ LIKHQLVTGK IIMLEPRRLA 61 ARNIARYLSE QLGEQVGQSV GYRVRGETKV SAATQLEIVT EGIMTRMIQN DPELDGVDLL 121 IFDEFHERSI HADTALAFSL EVQEALRDDL KLVVMSATLD QDALQVLLPE ASFIESEGRS 181 FDVETRYVPL AANDHLPVVM AKTIESLMNK ESGSLLAFLP GVAAIKQVEE RLSHLPTEVE 241 VCPLYGQLSF AEQQKAISPA VKGKRKVVLA TNIAETSLTI EGIRLVVDSG LERIARFDLK 301 NGLTRLEQVR IAQSSAIQRL GRAGRIEEGI CVRLYSESQF KQQPTVPQPE ILHSDLASLV 361 MELAFWGASD IQDLKWLNIP SQAALSQAKQ LLVSLGLLTE QGQLTANGRQ AHELGVEPRA 421 AAMLIKSSQH SEKMLNTALA AVALIEEPER NVTNIAHSLH RWVTGTHPKR SLLLKRAQSL 481 SHKLDGAFSV ADVDESALPL VLSLAFPDRI AQQRSNQYGR FTLSNGHGAE CRPDDTLGAS 541 EYLVAVDLMR SHSNSSQIHL ACELDVNLLQ TTFKSLFSSE ELVDWDEKRG RLIAQRQQKL 601 GQLVIESESL PSPGKEKMTQ ALLTYVRRQG LSSLNWSPTA ESLIERIRCA IDWLPEQPWP 661 SFDNESLLES LEEWLEPYMA SVSSVKDLNK VNLTEALNAR LGWPLNQNID EWLPEHYQLP 721 TGTKKCIRYQ YGHEPVLSVR MQEVFGESTS PTVALGRKPL VLELLSPAQR PLQVTTDLAA 781 FWKGSYKDVQ KEMKGRYPKH VWPDDPASHV ATTKTKRQLN ND //