LOCUS ALR16966.1 419 aa PRT BCT 02-SEP-2016 DEFINITION Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 transcription termination factor Rho protein. ACCESSION CP009977-2621 PROTEIN_ID ALR16966.1 SOURCE Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 ORGANISM Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio. REFERENCE 1 (bases 1 to 3248023) AUTHORS Lee,H. and Church,G.M. TITLE Vibrio natriegens genome v1.0 JOURNAL Unpublished REFERENCE 2 (bases 1 to 3248023) AUTHORS Lee,H. and Church,G.M. TITLE Direct Submission JOURNAL Submitted (21-NOV-2014) Genetics, Harvard Medical School, 77 Avenue Louis Pasteur, NRB 233, Boston, MA 02115, USA COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: RS HGAP v. 3 Assembly Name :: Vnat1.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 96.48x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/24/2014 10:39:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 2.9 (rev. 452286) Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 4,665 CDS :: 4,459 Pseudo Genes :: 42 rRNAs :: 34 (5S, 16S, 23S) tRNAs :: 129 ncRNA :: 1 Frameshifted Genes :: 10 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759" /mol_type="genomic DNA" /strain="ATCC 14048" /isolation_source="salt marsh mud" /culture_collection="ATCC:14048" /type_material="type strain of Vibrio natriegens" /db_xref="taxon:1219067" /chromosome="1" /country="USA" /collection_date="27-Feb-2012" protein /gene="rho" /locus_tag="PN96_13785" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_017631298.1" /note="An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MNLTELKNRP VSDLVKLGES LGLENLARLR KQDIIFAILK AHAKGGEDIF GDGVLEILQD 61 GFGFLRSADS SYLAGPDDIY VSPSQIRRFN LRTGDSIAGK IRPPKDGERY FALLKVNTVN 121 DDKPDNARNK ILFENLTPLH ANERMVMERG NGSTEDITAR VLDLASPIGK GQRGLIVAPP 181 KAGKTMLLQN IAQSIAYNHP ECELMVLLID ERPEEVTEMQ RLVKGEVVAS TFDEPASRHV 241 QVAEMVIEKA KRLVEHKKDV VILLDSITRL ARAYNTVVPS SGKVLTGGVD ANALHRPKRF 301 FGAARNVEEG GSLTIIATAL VDTGSKMDEV IYEEFKGTGN MELHLNRKIA EKRVFPAIDF 361 NRSGTRREEL LTKTDELQKM WILRKIVHPM GEIDAMEFLI DKLAMTKTND EFFDAMRRQ //