LOCUS ALR16584.1 781 aa PRT BCT 02-SEP-2016 DEFINITION Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 LPS biosynthesis protein protein. ACCESSION CP009977-2212 PROTEIN_ID ALR16584.1 SOURCE Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 ORGANISM Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio. REFERENCE 1 (bases 1 to 3248023) AUTHORS Lee,H. and Church,G.M. TITLE Vibrio natriegens genome v1.0 JOURNAL Unpublished REFERENCE 2 (bases 1 to 3248023) AUTHORS Lee,H. and Church,G.M. TITLE Direct Submission JOURNAL Submitted (21-NOV-2014) Genetics, Harvard Medical School, 77 Avenue Louis Pasteur, NRB 233, Boston, MA 02115, USA COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: RS HGAP v. 3 Assembly Name :: Vnat1.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 96.48x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/24/2014 10:39:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 2.9 (rev. 452286) Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 4,665 CDS :: 4,459 Pseudo Genes :: 42 rRNAs :: 34 (5S, 16S, 23S) tRNAs :: 129 ncRNA :: 1 Frameshifted Genes :: 10 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759" /mol_type="genomic DNA" /strain="ATCC 14048" /isolation_source="salt marsh mud" /culture_collection="ATCC:14048" /type_material="type strain of Vibrio natriegens" /db_xref="taxon:1219067" /chromosome="1" /country="USA" /collection_date="27-Feb-2012" protein /locus_tag="PN96_11625" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_006742729.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MQHFSRTFLA ASISTALFVP TTQADANIHD SVQEMPTTDQ CLVETSGEQD ALNAPVVVEA 61 DRLQAISGDK AQYSGNVQVT QGQKKITADS VTLHQQDNVV VAEGNVTFND GQVEARSDRV 121 TSDIDQDTFS LENTDYHFIC QQGRGTAAYI ARTGQSIYEL EDGSITSCPQ GDNSWRLVAS 181 GIDVDQDEET ATLHHPRFEV LDVPIFYVPY LTMPIGNTRK SGLLFPSLSY GSSDGMEVEV 241 PFYWNIAPQY DMTLTTLYMQ QRGTKFDTDF RYLTDGWGEG EIKGEYLNSD RKYADETRWG 301 YQFKHEGIID KHWVVDVDYS EVSDIDYFLD LDSDIGNRED GQLMQEGEVQ YRSDFWDASL 361 SVRDFQVLLQ EENKPYRLMP QLALNYYTPV WGNYLNFDVK SQLSRFDTSD NAKPDATRFH 421 IEPGFTIPLS NSWSAWTTEA RVLATYYSQD LNGLTDSDLE LQLDEKVSRV IPEFRSNAQI 481 YLERDTSWVE GYTQTLEPQV QYLYVPKEDQ TNIYNYDTTL LQTDYYGLFR SRKYSSIDKI 541 ASANQLSYGA STRFFDDDYK ERLNISFGQI YYFDKKTKLS NNPTDPDETT NYSSWAIEAD 601 FNYNDSVFYH GGIQYDIDLG SMQLANSTLE YQFDGGFIQS NYRYVTREYI EDTIILENLD 661 TITRKGISQA GIVAAYEFNQ NWSASGQYYY DLNENNDLEW LAGLRYQSDC WYIGLTYSNQ 721 LLGWEDQIIG GSGASAEYES NFSVSVGIQG FATNQTNGTA AKELEGSDNT IKYGRPFYLN 781 N //