LOCUS ALR16464.1 407 aa PRT BCT 02-SEP-2016 DEFINITION Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 ATP- dependent RNA helicase SrmB protein. ACCESSION CP009977-2089 PROTEIN_ID ALR16464.1 SOURCE Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 ORGANISM Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio. REFERENCE 1 (bases 1 to 3248023) AUTHORS Lee,H. and Church,G.M. TITLE Vibrio natriegens genome v1.0 JOURNAL Unpublished REFERENCE 2 (bases 1 to 3248023) AUTHORS Lee,H. and Church,G.M. TITLE Direct Submission JOURNAL Submitted (21-NOV-2014) Genetics, Harvard Medical School, 77 Avenue Louis Pasteur, NRB 233, Boston, MA 02115, USA COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: RS HGAP v. 3 Assembly Name :: Vnat1.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 96.48x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/24/2014 10:39:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 2.9 (rev. 452286) Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 4,665 CDS :: 4,459 Pseudo Genes :: 42 rRNAs :: 34 (5S, 16S, 23S) tRNAs :: 129 ncRNA :: 1 Frameshifted Genes :: 10 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759" /mol_type="genomic DNA" /strain="ATCC 14048" /isolation_source="salt marsh mud" /culture_collection="ATCC:14048" /type_material="type strain of Vibrio natriegens" /db_xref="taxon:1219067" /chromosome="1" /country="USA" /collection_date="27-Feb-2012" protein /locus_tag="PN96_11005" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_014230842.1" /note="facilitates an early step in the assembly of the 50S subunit of the ribosome; Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MIRTFAELDL DSNLLDAIEE MGFERPTKVQ AEAIPQALDG RDILASAPTG TGKTAAFVLP 61 ALQYLQDFPR RKPGPARILI LTPTRELAMQ VADQARALAK NTKLNIFTIT GGVQYQEHAD 121 ILATTQDIVV ATPGRLREYI EAERFDCRAI EWLILDEADR MLDMGFAPTV DRLSNECRWR 181 KQTLLFSATL EGRGVEGFTA DLLNEPAEID AKSPLRERKK IAQWYHRADD AEHKLALLKH 241 IITEQAERTI VFLKTRERLA ELRSQLESAQ IPCSWIQGEM PQDRRNNAIA RFRDGTVNVL 301 LATDVAARGI DLPDVSHVIN YDLPRTADVY LHRIGRTARA GKKGNAISIV EAHDQPMMDR 361 VARYVKEDIK ERFIKEMRPK HKKPVFKKKK KKDDKKKTAK KKVAKKK //