LOCUS ALR16439.1 942 aa PRT BCT 02-SEP-2016 DEFINITION Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 isoleucine- -tRNA ligase protein. ACCESSION CP009977-2063 PROTEIN_ID ALR16439.1 SOURCE Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 ORGANISM Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio. REFERENCE 1 (bases 1 to 3248023) AUTHORS Lee,H. and Church,G.M. TITLE Vibrio natriegens genome v1.0 JOURNAL Unpublished REFERENCE 2 (bases 1 to 3248023) AUTHORS Lee,H. and Church,G.M. TITLE Direct Submission JOURNAL Submitted (21-NOV-2014) Genetics, Harvard Medical School, 77 Avenue Louis Pasteur, NRB 233, Boston, MA 02115, USA COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: RS HGAP v. 3 Assembly Name :: Vnat1.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 96.48x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/24/2014 10:39:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 2.9 (rev. 452286) Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 4,665 CDS :: 4,459 Pseudo Genes :: 42 rRNAs :: 34 (5S, 16S, 23S) tRNAs :: 129 ncRNA :: 1 Frameshifted Genes :: 10 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759" /mol_type="genomic DNA" /strain="ATCC 14048" /isolation_source="salt marsh mud" /culture_collection="ATCC:14048" /type_material="type strain of Vibrio natriegens" /db_xref="taxon:1219067" /chromosome="1" /country="USA" /collection_date="27-Feb-2012" protein /gene="ileS" /locus_tag="PN96_10875" /EC_number="6.1.1.5" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_012842132.1" /note="IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MSEYKDTLNL PETGFPMRGN LANREPEMLK RWYKEDLYGE IRKAKKGKKS FVLHDGPPYA 61 NGDIHIGHAL NKILKDIIIK SKTLSGFDAP YIPGWDCHGL PIELMVEKKV GKPGQKVTAA 121 EFREKCREYA AGQVEGQKES FKRLGILGEW DKPYRTMDFD TEANIIRALG KIASKGHLLK 181 GFKPVHWCTD CGSALAEAEV EYKDKVSPSI DVRFKTADEA ALLSKFELTE GHEGKGDISI 241 VIWTTTPWTL PANRAVCLRD DLEYVLIQVE GDNPERIIVA AELAKDVMDR AGIEHFHNLG 301 FAKGADLELS QFQHPFYDFT VPAILGDHVT TDSGTGVVHT APGHGQEDFA VGQKYDLEVA 361 NPVGSNGVYL PDTELFAGQH VFKANDAVVE TLKEKGALLH HHAYEHSYPH CWRHKTPIIF 421 RATPQWFVSM DQAGLRAKAL EAIKGVQWMP EWGQSRIEGM IEGRPEWCIS RQRTWGVPIA 481 LFVHKETAEL HPNTLELIEK VAKLVEEKGI QAWWDVDAAE LLGDEAEQYE KVLDTLDVWF 541 DSGVTHFSVV DAREEYNGHS ADLYLEGSDQ HRGWFQSSLI SSIAMKDEAP YKQVLTHGFV 601 VDGHGRKMSK SIGNVVAPKD VTNKLGADIL RLWVASTDYT GEVAVSDEIL KRSADAYRRI 661 RNTSRFFLAN LNGFNPETDI VPAEEMVALD RWAVGRALAA QEEIVKAYGE YNTHAVMQRL 721 MHFCSIEMGS FYLDVIKDRQ YTAKRGGHAQ RSCQTALYYI VEALVRWMAP IMSFTADEIW 781 NEMPGKREKF VLCDEWYEGL FGLNEGEELN NDFWTEIQKV RGAVNKLLEA ARAEKTIGGA 841 LQAELTLFAD DALEAKINKL DDELRFVLLT SAATVKPLSE KSDAAQATDI EGLFVEVKAT 901 ESEKCDRCWH HTPDVGTIAG HEKICGRCVS NVEGEGEVRK FA //