LOCUS       ALR15998.1               741 aa    PRT              BCT 02-SEP-2016
DEFINITION  Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 isocitrate
            dehydrogenase protein.
ACCESSION   CP009977-1597
PROTEIN_ID  ALR15998.1
SOURCE      Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759
  ORGANISM  Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759
            Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;
            Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 3248023)
  AUTHORS   Lee,H. and Church,G.M.
  TITLE     Vibrio natriegens genome v1.0
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3248023)
  AUTHORS   Lee,H. and Church,G.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-NOV-2014) Genetics, Harvard Medical School, 77 Avenue
            Louis Pasteur, NRB 233, Boston, MA 02115, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: RS HGAP v. 3
            Assembly Name          :: Vnat1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 96.48x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/24/2014 10:39:19
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 2.9 (rev. 452286)
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 4,665
            CDS                          :: 4,459
            Pseudo Genes                 :: 42
            rRNAs                        :: 34 (5S, 16S, 23S)
            tRNAs                        :: 129
            ncRNA                        :: 1
            Frameshifted Genes           :: 10
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM
                     759"
                     /mol_type="genomic DNA"
                     /strain="ATCC 14048"
                     /isolation_source="salt marsh mud"
                     /culture_collection="ATCC:14048"
                     /type_material="type strain of Vibrio natriegens"
                     /db_xref="taxon:1219067"
                     /chromosome="1"
                     /country="USA"
                     /collection_date="27-Feb-2012"
     protein         /locus_tag="PN96_08360"
                     /EC_number="1.1.1.42"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_005481838.1"
                     /note="NADP-specific, catalyzes the formation of
                     2-oxoglutarate from isocitrate or oxalosuccinate; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MPTEKPTIIY TITDEAPALA TYSLLPIIQS FTASSGINVD TRDISLAGRI IANFPEHLKE
       61 EQRIGDALTE LGNLAQTPEA NIIKLPNISA SIPQLRAAIK ELQSKGYDLP NYPDEPATYE
      121 EEAIKAAYDK IKGSAVNPVL REGNSDRRAP LSVKNYAKKN PHSMGAWSAD SKSHVASMSG
      181 NDFFGSEKST TVSGATDVKI EFVGADGSVK ELKAAFPLLD KEVIDSSVMK KKALVEFFEK
      241 EIAEAKAQDV LLSLHMKATM MKVSDPVIFG HAVKVYYKDV FAKYGKLFEE LGVDVNNGLG
      301 DVYAKIESLP AAQKEEIEAA IQAVYQTQPE LAMVDSDRGI TNLHVPSDII VDASMPAMLR
      361 SSGQMWGPDG KQKDTKALIP DRCYAGIYQA VIDFCKEHGA FDPTTMGSVP NVGLMAQKAE
      421 EYGSHDKTFI LDAAGTVRVV DTAGQVLLEQ AVEEGDIFRM CQVKDAPIQD WVKLAVTRAR
      481 ATGVPAVFWL DENRAHDAEL IKKVNAYLPD HDTDGLEIKI LSPVDACLYS LERIKAGLDT
      541 ISVTGNVLRD YLTDLFPILE LGTSAKMLSI VPLMNGGGLF ETGAGGSAPK HVQQVEKENH
      601 LRWDSLGEFL ALAASLEHLS VATGNAKAQV LADTLDKATG EFLDNNKSPS RKVGELDNRG
      661 SHYYLASYWA KALAEQTADA DLAAEFAPIA KALSEQEEAI VAELNNAQGV KGELGGYYLL
      721 DDSLTSKLMR PSAILNSIID K
//