LOCUS       ALR15482.1               336 aa    PRT              BCT 02-SEP-2016
DEFINITION  Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 dihydroorotate
            dehydrogenase protein.
ACCESSION   CP009977-1052
PROTEIN_ID  ALR15482.1
SOURCE      Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759
  ORGANISM  Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759
            Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;
            Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 3248023)
  AUTHORS   Lee,H. and Church,G.M.
  TITLE     Vibrio natriegens genome v1.0
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3248023)
  AUTHORS   Lee,H. and Church,G.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-NOV-2014) Genetics, Harvard Medical School, 77 Avenue
            Louis Pasteur, NRB 233, Boston, MA 02115, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: RS HGAP v. 3
            Assembly Name          :: Vnat1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 96.48x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/24/2014 10:39:19
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 2.9 (rev. 452286)
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 4,665
            CDS                          :: 4,459
            Pseudo Genes                 :: 42
            rRNAs                        :: 34 (5S, 16S, 23S)
            tRNAs                        :: 129
            ncRNA                        :: 1
            Frameshifted Genes           :: 10
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM
                     759"
                     /mol_type="genomic DNA"
                     /strain="ATCC 14048"
                     /isolation_source="salt marsh mud"
                     /culture_collection="ATCC:14048"
                     /type_material="type strain of Vibrio natriegens"
                     /db_xref="taxon:1219067"
                     /chromosome="1"
                     /country="USA"
                     /collection_date="27-Feb-2012"
     protein         /locus_tag="PN96_05605"
                     /EC_number="1.3.98.1"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_010448024.1"
                     /note="catalyzes the conversion of dihydroorotate to
                     orotate in the pyrimidine biosynthesis pathway; uses a
                     flavin nucleotide as an essential cofactor; class 2
                     enzymes are monomeric and compared to the class 1 class 2
                     possess an extended N terminus, which plays a role in the
                     membrane association of the enzyme and provides the
                     binding site for the respiratory quinones that serve as
                     physiological electron acceptors; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /transl_table=11
BEGIN
        1 MLYRLARTGF FQLDAEKAHD LAIKNFQRFN GTPLDLFYRQ QLPNRPVECM GLTFRNPVGL
       61 AAGLDKNGEC IEAFDAMGFG FVEVGTVTPR PQPGNDKPRL FRLVEAEGII NRMGFNNLGV
      121 DHLVENVKKA KFDCVLGINI GKNKDTPIEK GAEDYLICME KVYEYAGYIA VNISSPNTPG
      181 LRSLQYGEAL DELLAELKAK QSELAEKHDK YVPLALKIAP DLSDDEIVQI CESLIKNNID
      241 GVIATNTTLD RTVVEGMKHA NEAGGLSGRP VQSRSTEVVR KLHEALGDKL PIIGVGGIDS
      301 YVAAKEKMMA GAQLVQVYTG FIYHGPGLVR DIVKNL
//