LOCUS ALR14870.1 1159 aa PRT BCT 02-SEP-2016 DEFINITION Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 DNA polymerase III subunit alpha protein. ACCESSION CP009977-411 PROTEIN_ID ALR14870.1 SOURCE Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 ORGANISM Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio. REFERENCE 1 (bases 1 to 3248023) AUTHORS Lee,H. and Church,G.M. TITLE Vibrio natriegens genome v1.0 JOURNAL Unpublished REFERENCE 2 (bases 1 to 3248023) AUTHORS Lee,H. and Church,G.M. TITLE Direct Submission JOURNAL Submitted (21-NOV-2014) Genetics, Harvard Medical School, 77 Avenue Louis Pasteur, NRB 233, Boston, MA 02115, USA COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: RS HGAP v. 3 Assembly Name :: Vnat1.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 96.48x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/24/2014 10:39:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 2.9 (rev. 452286) Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 4,665 CDS :: 4,459 Pseudo Genes :: 42 rRNAs :: 34 (5S, 16S, 23S) tRNAs :: 129 ncRNA :: 1 Frameshifted Genes :: 10 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759" /mol_type="genomic DNA" /strain="ATCC 14048" /isolation_source="salt marsh mud" /culture_collection="ATCC:14048" /type_material="type strain of Vibrio natriegens" /db_xref="taxon:1219067" /chromosome="1" /country="USA" /collection_date="27-Feb-2012" protein /gene="dnaE" /locus_tag="PN96_02335" /EC_number="2.7.7.7" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_017047313.1" /note="catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MSDPKFIHLR VHSDFSMVDG ISKVPPIVKK VAELGMPAMA LTDFTNLCGL VKFYGTAHGC 61 GVKPIIGADF KMQSDEFGEE LTQLTVLAAD NVGYKNLTLL ISKAYLRGHI QHQPVIDKSW 121 LAEMSEGLIV LSGGKNGDIG KALLKGNRNL VQSCVEFYKQ HFPDRYYLEL LRTGRPDEET 181 YLHFAVELAE QVDLPVVATN EVVFLSSDLF DAHEIRVAIH DGYTLEDPRR PKNYSPQQYL 241 RSEEEMCELF ADIPEALENS VEIAKRCNVT VRLGEYFLPA FPTEGMKETE FLVMKSREGL 301 EERLEFLFPD EEERKKRRPE YDERLQIELD VINQMGFPGY FLIVMEFIQW SKDNDIPVGP 361 GRGSGAGSLV AYALKITDLD PLEYDLLFER FLNPERVSMP DFDVDFCMDK RDQVIDHVAE 421 MYGRDAVSQI ITFGTMAAKA VIRDVGRVLG HPFGFVDRIS KLIPPDPGMT LDKAFKAEPA 481 LPELYEADEE VKELIDMCHI LEGCTRNAGK HAGGVVISPT TITDFAPIYA DSEGHFPVTQ 541 FDKNDVETAG LVKFDFLGLR TLTIIDWALG LINPRLEREG KAPVRIESIP LDDQASFRLL 601 QNSETTAVFQ LESRGMKELI KRLQPDCFED IIALVALFRP GPLQSGMVDN FIDRKHGREA 661 ISYPDEKWQH ESLKEILDPT YGIILYQEQV MQIAQVLSGY TLGGADMLRR AMGKKKPEEM 721 AKQRATFEEG AVKNGVDGEL AMKIFDLVEK FAGYGFNKSH SAAYALVSYQ TLWLKMHYPA 781 EFMAAVMTAD MDNTEKVVGL VDECFRMKLT VLPPDINSGL YRFNVDENGA IVYGIGAIKG 841 VGEGPIDAIL EARNKGGHFK DLFDFCARID LKRVNKRVIE KLIYAGALDR LGPHRAAMMA 901 SLNDAVKAAS QHHQAEAFGQ ADMFGVLTDA PEEVEHKYTQ VPPWPEKVWL EGERETLGLY 961 LTGHPINAYL KELNKYTSCR LKDATPTRRD QSVTVAGLVI AARVMTTKRG TRIGIMTLDD 1021 RSGRMEVMLF SDALDRYAEL LEKDRILVVS GQVSFDDFNG GLKMSAREVM DLGSAREKYA 1081 RGLSVSIDAN QINDQFFEQF SRILEPHKAG TVPVNVYYQR ADARARLTLG TEWRVTPSDT 1141 LIDDLKQLLG TNQVELEFN //