LOCUS ALR14806.1 1163 aa PRT BCT 02-SEP-2016 DEFINITION Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 exonuclease V subunit gamma protein. ACCESSION CP009977-345 PROTEIN_ID ALR14806.1 SOURCE Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 ORGANISM Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio. REFERENCE 1 (bases 1 to 3248023) AUTHORS Lee,H. and Church,G.M. TITLE Vibrio natriegens genome v1.0 JOURNAL Unpublished REFERENCE 2 (bases 1 to 3248023) AUTHORS Lee,H. and Church,G.M. TITLE Direct Submission JOURNAL Submitted (21-NOV-2014) Genetics, Harvard Medical School, 77 Avenue Louis Pasteur, NRB 233, Boston, MA 02115, USA COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: RS HGAP v. 3 Assembly Name :: Vnat1.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 96.48x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/24/2014 10:39:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 2.9 (rev. 452286) Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 4,665 CDS :: 4,459 Pseudo Genes :: 42 rRNAs :: 34 (5S, 16S, 23S) tRNAs :: 129 ncRNA :: 1 Frameshifted Genes :: 10 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759" /mol_type="genomic DNA" /strain="ATCC 14048" /isolation_source="salt marsh mud" /culture_collection="ATCC:14048" /type_material="type strain of Vibrio natriegens" /db_xref="taxon:1219067" /chromosome="1" /country="USA" /collection_date="27-Feb-2012" protein /gene="recC" /locus_tag="PN96_02005" /EC_number="3.1.11.5" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_014232816.1" /note="catalyzes ATP-dependent exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield 5'-phosphooligonucleotides; component of the RecBCD (Exo V) helicase/nuclease complex that is essential for recombination; Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MFTVYHSNQV DVLKSLLVEL IRISPLENPF EKEQILVQSP GMSQWLKMEL AKEFGVAANI 61 DFPLPATFIW EMFTQVLPDV PKRSAFNKEA MTWKLMHLLP GLLNQETFSP LAQYLKDDSD 121 NSKLYQLAEK IADIFDGYLV YRPEWIASWE AGQSVPELED EHPWQPILWQ ALYDHTVSLG 181 QSPYHRANLY EHFIDTLENF NGNFDHLPKR LFVFGISSLP PRYMDALKAI GEHIDVHLMF 241 TNPCRYYWGE VRDRKYLARL AAKHRQHVVW QDDHSEVQGE TEQLKGSVED NVLDELHTDV 301 VGNSLLASMG KLGRDNMYLL SQLESHEIEA FVDVERDSLL HQLQGDILNL EEHQDDQQIE 361 HSGHKQVVSL GDKSLSLHAC HSPMREVEVL HDQLLAMFDA DPSLKPRDII VMVADINAYS 421 PAIQAVFGNA PGERFIPYSI SDRTADQESP ILAAFMQLVN LPNTRCLASE LLELLETPAI 481 LKRFELSEDD FLQAKQWVEA SGIRWGLDAN TGREFELPET RQNTWQFGIQ RMLLGYAMPE 541 SAGLFETEQG SLSPYNEVQG MGAELAGKLA HFIQQVSTYR RKISHVQTID GWRETLVTLL 601 DDFFSVELEG EMALKSIRDT LSQLKEQLAD AAFEEVLSPA IIRQYLQDKL SGTRVSQRFL 661 AGQVNFCTLM PMRSIPFRTV CLLGMNDGVY PRSMPPEGFD LMTGRTKPGD RSRRDDDRYL 721 FLEAMLSAQQ TLYISYVGRS IQDNTERVPS VLVSELMEYC HQNYCLGGDE GLPVDESGDN 781 LLKALVNTHA MVPFSPSAFQ GIHSSYAKEW VPAALTQSSQ SQGYVRHDFN RALDDYLLGA 841 TFPLELDLVE LQRFWRLPVQ YFFNRRLKVV FEPPLPVMED DEPFVLGGLE SYQMRDELLE 901 TLLETTLTQP EKKTDVLKHF MSQQRAQGKL PVGAFGDIEF ETNRVQAEEL VDKLAFLSGA 961 PQDDLEIDLT FDSLFEGNEG DEKKVRLTGW LTQCYQSGLI RYRSGRVRSQ DYLAAWIDHL 1021 AMSASGHAKK THIIGYDRKE GAVHLIYPEI ADAQYAKQLL TELVRLFFEG MTKPLPYFPQ 1081 TALACVEAGF SRGHWADDEE KSLKKMADTF NDGYMSSGEG NNAYIARIWP AWNDDLAKEV 1141 RLLTALVLQG ARLAVQDADD IKA //