LOCUS       ALR14738.1               495 aa    PRT              BCT 02-SEP-2016
DEFINITION  Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 transcription
            elongation factor NusA protein.
ACCESSION   CP009977-273
PROTEIN_ID  ALR14738.1
SOURCE      Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759
  ORGANISM  Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759
            Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;
            Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 3248023)
  AUTHORS   Lee,H. and Church,G.M.
  TITLE     Vibrio natriegens genome v1.0
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3248023)
  AUTHORS   Lee,H. and Church,G.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-NOV-2014) Genetics, Harvard Medical School, 77 Avenue
            Louis Pasteur, NRB 233, Boston, MA 02115, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: RS HGAP v. 3
            Assembly Name          :: Vnat1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 96.48x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/24/2014 10:39:19
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 2.9 (rev. 452286)
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 4,665
            CDS                          :: 4,459
            Pseudo Genes                 :: 42
            rRNAs                        :: 34 (5S, 16S, 23S)
            tRNAs                        :: 129
            ncRNA                        :: 1
            Frameshifted Genes           :: 10
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM
                     759"
                     /mol_type="genomic DNA"
                     /strain="ATCC 14048"
                     /isolation_source="salt marsh mud"
                     /culture_collection="ATCC:14048"
                     /type_material="type strain of Vibrio natriegens"
                     /db_xref="taxon:1219067"
                     /chromosome="1"
                     /country="USA"
                     /collection_date="27-Feb-2012"
     protein         /gene="nusA"
                     /locus_tag="PN96_01645"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_017419789.1"
                     /note="modifies transcription through interactions with
                     RNA polymerase affecting elongation, readthrough,
                     termination, and antitermination; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /transl_table=11
BEGIN
        1 MSKEILAVAE AVSNEKAVPR ERIFEALEIA LATSTKKKYE IEIDVRVAID RKTGEFVTYR
       61 RWLVVDNVEN PTKEISLEAA QYDDESVELG DYVEDEIQSV TFDRITTQTA KQVIVQKVRE
      121 AERAQIVEQF IDNEGDLITG VVKKVNRDTI VLDLGNNAEA VILRDDQLPR ENFRPGDRVR
      181 GLLYKVAPEA RGFQLFITRS KPEMLAELFR VEVPEIAEDI IELKGAARDP GSRAKIAVKT
      241 NDKRIDPVGA CVGMRGARVQ AVSGELGGER IDIVLWDDNP AQFVINAMAP ADVASIIVDE
      301 DAHAMDIAVE ADNLAQAIGR NGQNVRLASQ LTGWELNVMT VADLQKKHAE ESQASIENFM
      361 KYLDIEEDFA QLLVEEGFST LEEVAYVPVN ELLEVDGLNE ELIEELRGRA KDALTTIALA
      421 QEESFEGLEP AEDLLGLEGL EREMAFKLAA KGVATLEDLA DQGIDDLEGI EGLTEERAGE
      481 LIMAARNICW FGEEA
//