LOCUS ALR14650.1 853 aa PRT BCT 02-SEP-2016 DEFINITION Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 DNA mismatch repair protein MutS protein. ACCESSION CP009977-180 PROTEIN_ID ALR14650.1 SOURCE Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 ORGANISM Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio. REFERENCE 1 (bases 1 to 3248023) AUTHORS Lee,H. and Church,G.M. TITLE Vibrio natriegens genome v1.0 JOURNAL Unpublished REFERENCE 2 (bases 1 to 3248023) AUTHORS Lee,H. and Church,G.M. TITLE Direct Submission JOURNAL Submitted (21-NOV-2014) Genetics, Harvard Medical School, 77 Avenue Louis Pasteur, NRB 233, Boston, MA 02115, USA COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: RS HGAP v. 3 Assembly Name :: Vnat1.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 96.48x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/24/2014 10:39:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 2.9 (rev. 452286) Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 4,665 CDS :: 4,459 Pseudo Genes :: 42 rRNAs :: 34 (5S, 16S, 23S) tRNAs :: 129 ncRNA :: 1 Frameshifted Genes :: 10 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759" /mol_type="genomic DNA" /strain="ATCC 14048" /isolation_source="salt marsh mud" /culture_collection="ATCC:14048" /type_material="type strain of Vibrio natriegens" /db_xref="taxon:1219067" /chromosome="1" /country="USA" /collection_date="27-Feb-2012" protein /locus_tag="PN96_01120" /inference="EXISTENCE: similar to AA sequence:SwissProt:Q87LQ9.1" /note="This protein performs the mismatch recognition step during the DNA repair process; Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MKAEQKHTPM MQQYLKLKAE NPDILLFYRM GDFYELFYDD AKRASQLLDI SLTKRGASAG 61 EPIPMAGVPF HAVEGYLAKL VQLGESVAIC EQIGDPATSK GPVERKVVRI VTPGTVTDEA 121 LLSERLDNLI AAIYHHNGKF GYATLDVTSG RFQLTEPETE EAMAAELQRT APRELLFPED 181 FEPVHLMSSR NGNRRRPVWE FELDTAKQQL NQQFGTKDLI GFGVEHASLG LCAAGCLIQY 241 VKDTQRTALP HIRSLTFDRQ DHSVILDAAT RRNLEITQNL AGSTDNTLAA VLDHCATPMG 301 SRMLKRWLHQ PMRCIDTLNN RLDAIGEIKD QSLFADLQPT LKQIGDIERI LARLALRSAR 361 PRDMARLRHA MQQLPELEAI TASLTHPYLV KLAQFAAPID DVCELLERAI KENPPVVIRD 421 GGVIAEGYNE ELDEWRKLAD GATEYLEKLE SDERERHGID TLKVGYNNVH GFYIQVSRGQ 481 SHLVPPHYVR RQTLKNAERY IIPELKEHED KVLNSKSKAL ALEKQLWEGL FDLLMPNLEQ 541 LQNLASAVSQ LDVLQNLAER ADSLDYCRPT LVKEPGIQIQ SGRHPVVEQV TSDPFIANPI 601 ELNPQRKMLI ITGPNMGGKS TYMRQTALIA LMAHIGSYVP AESAQIGSLD RIFTRIGASD 661 DLASGRSTFM VEMTETANIL HNATKNSLVL MDEIGRGTST YDGLSLAWAS AEWLATQIGA 721 MTLFATHYFE LTELPSQLPN LANVHLDAVE HGDSIAFMHA VQEGAASKSY GLAVAGLAGV 781 PKTVIKNARA KLSQLEQLSH GNDSPRPGAV DVANQLSLIP EPSEVEQALS NIDPDEMTPR 841 QALEELYRLK KML //