LOCUS       ALR14650.1               853 aa    PRT              BCT 02-SEP-2016
DEFINITION  Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 DNA
            mismatch repair protein MutS protein.
ACCESSION   CP009977-180
PROTEIN_ID  ALR14650.1
SOURCE      Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759
  ORGANISM  Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759
            Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;
            Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 3248023)
  AUTHORS   Lee,H. and Church,G.M.
  TITLE     Vibrio natriegens genome v1.0
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3248023)
  AUTHORS   Lee,H. and Church,G.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-NOV-2014) Genetics, Harvard Medical School, 77 Avenue
            Louis Pasteur, NRB 233, Boston, MA 02115, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: RS HGAP v. 3
            Assembly Name          :: Vnat1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 96.48x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/24/2014 10:39:19
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 2.9 (rev. 452286)
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 4,665
            CDS                          :: 4,459
            Pseudo Genes                 :: 42
            rRNAs                        :: 34 (5S, 16S, 23S)
            tRNAs                        :: 129
            ncRNA                        :: 1
            Frameshifted Genes           :: 10
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM
                     759"
                     /mol_type="genomic DNA"
                     /strain="ATCC 14048"
                     /isolation_source="salt marsh mud"
                     /culture_collection="ATCC:14048"
                     /type_material="type strain of Vibrio natriegens"
                     /db_xref="taxon:1219067"
                     /chromosome="1"
                     /country="USA"
                     /collection_date="27-Feb-2012"
     protein         /locus_tag="PN96_01120"
                     /inference="EXISTENCE: similar to AA
                     sequence:SwissProt:Q87LQ9.1"
                     /note="This protein performs the mismatch recognition step
                     during the DNA repair process; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /transl_table=11
BEGIN
        1 MKAEQKHTPM MQQYLKLKAE NPDILLFYRM GDFYELFYDD AKRASQLLDI SLTKRGASAG
       61 EPIPMAGVPF HAVEGYLAKL VQLGESVAIC EQIGDPATSK GPVERKVVRI VTPGTVTDEA
      121 LLSERLDNLI AAIYHHNGKF GYATLDVTSG RFQLTEPETE EAMAAELQRT APRELLFPED
      181 FEPVHLMSSR NGNRRRPVWE FELDTAKQQL NQQFGTKDLI GFGVEHASLG LCAAGCLIQY
      241 VKDTQRTALP HIRSLTFDRQ DHSVILDAAT RRNLEITQNL AGSTDNTLAA VLDHCATPMG
      301 SRMLKRWLHQ PMRCIDTLNN RLDAIGEIKD QSLFADLQPT LKQIGDIERI LARLALRSAR
      361 PRDMARLRHA MQQLPELEAI TASLTHPYLV KLAQFAAPID DVCELLERAI KENPPVVIRD
      421 GGVIAEGYNE ELDEWRKLAD GATEYLEKLE SDERERHGID TLKVGYNNVH GFYIQVSRGQ
      481 SHLVPPHYVR RQTLKNAERY IIPELKEHED KVLNSKSKAL ALEKQLWEGL FDLLMPNLEQ
      541 LQNLASAVSQ LDVLQNLAER ADSLDYCRPT LVKEPGIQIQ SGRHPVVEQV TSDPFIANPI
      601 ELNPQRKMLI ITGPNMGGKS TYMRQTALIA LMAHIGSYVP AESAQIGSLD RIFTRIGASD
      661 DLASGRSTFM VEMTETANIL HNATKNSLVL MDEIGRGTST YDGLSLAWAS AEWLATQIGA
      721 MTLFATHYFE LTELPSQLPN LANVHLDAVE HGDSIAFMHA VQEGAASKSY GLAVAGLAGV
      781 PKTVIKNARA KLSQLEQLSH GNDSPRPGAV DVANQLSLIP EPSEVEQALS NIDPDEMTPR
      841 QALEELYRLK KML
//