LOCUS ALR14575.1 356 aa PRT BCT 02-SEP-2016 DEFINITION Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 lipopolysacchari de ABC transporter permease protein. ACCESSION CP009977-102 PROTEIN_ID ALR14575.1 SOURCE Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 ORGANISM Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio. REFERENCE 1 (bases 1 to 3248023) AUTHORS Lee,H. and Church,G.M. TITLE Vibrio natriegens genome v1.0 JOURNAL Unpublished REFERENCE 2 (bases 1 to 3248023) AUTHORS Lee,H. and Church,G.M. TITLE Direct Submission JOURNAL Submitted (21-NOV-2014) Genetics, Harvard Medical School, 77 Avenue Louis Pasteur, NRB 233, Boston, MA 02115, USA COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: RS HGAP v. 3 Assembly Name :: Vnat1.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 96.48x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/24/2014 10:39:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 2.9 (rev. 452286) Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 4,665 CDS :: 4,459 Pseudo Genes :: 42 rRNAs :: 34 (5S, 16S, 23S) tRNAs :: 129 ncRNA :: 1 Frameshifted Genes :: 10 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759" /mol_type="genomic DNA" /strain="ATCC 14048" /isolation_source="salt marsh mud" /culture_collection="ATCC:14048" /type_material="type strain of Vibrio natriegens" /db_xref="taxon:1219067" /chromosome="1" /country="USA" /collection_date="27-Feb-2012" protein /locus_tag="PN96_00625" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_010648057.1" /note="with LptABCF is involved in the transport of lipopolysaccharides; Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MFKILDLYIG RTIISTTALV LATFVGLSGI IKYVEQLRKV GRGVYDLMHA LYFVLLSIPR 61 DIEMFFPMAA LLGALIGLGM LASSSELVVM QAAGFSKLDI GLSVLKTAVP LMLIVMTLGQ 121 WGAPEAQKMA RDLRSFAISG GSIVSVRAGV WARDANDFIF IGKVEDDKLY ALNMWRFDED 181 KNLQKVIFAE EVDYEQDNNW VMKDVQITDM QGETVISKQS VDQMEWQTSL APDKLAVVTV 241 KPEELSLSGL YDYVTYLKAS EQDASRYELA FWRKLTQPLS IAVMMLMALS FVFGPLRSVT 301 MGARVLSGVV AGFTFYISSE FFGPLTLVYG IPPVFGALAP SLVFLAIAVS LLRRKL //