LOCUS ALR14538.1 969 aa PRT BCT 02-SEP-2016 DEFINITION Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 ATP- dependent helicase protein. ACCESSION CP009977-64 PROTEIN_ID ALR14538.1 SOURCE Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 ORGANISM Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio. REFERENCE 1 (bases 1 to 3248023) AUTHORS Lee,H. and Church,G.M. TITLE Vibrio natriegens genome v1.0 JOURNAL Unpublished REFERENCE 2 (bases 1 to 3248023) AUTHORS Lee,H. and Church,G.M. TITLE Direct Submission JOURNAL Submitted (21-NOV-2014) Genetics, Harvard Medical School, 77 Avenue Louis Pasteur, NRB 233, Boston, MA 02115, USA COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: RS HGAP v. 3 Assembly Name :: Vnat1.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 96.48x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 11/24/2014 10:39:19 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 2.9 (rev. 452286) Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 4,665 CDS :: 4,459 Pseudo Genes :: 42 rRNAs :: 34 (5S, 16S, 23S) tRNAs :: 129 ncRNA :: 1 Frameshifted Genes :: 10 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759" /mol_type="genomic DNA" /strain="ATCC 14048" /isolation_source="salt marsh mud" /culture_collection="ATCC:14048" /type_material="type strain of Vibrio natriegens" /db_xref="taxon:1219067" /chromosome="1" /country="USA" /collection_date="27-Feb-2012" protein /locus_tag="PN96_00435" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_004735918.1" /note="transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA; Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MTFALGQRWI SDTESDLGLG TVVAMDARTV TLMFSASEEN RVYARNDAPV TRVTFNVGDV 61 IDCQEGWSLK VEEVLEDEGL YTYFGTREDT QETAVVLREI FLSNQIRFNK PQDKLYAGQI 121 DRMDNFVLRY RALTNQFEQH KSPMRGLCGM RAGLIPHQLY IAHEVGRRHA PRVLLADEVG 181 LGKTIEAGMI IHQQVLSGRA ERILIVVPET LQHQWLVEMM RRFNLHFSIF DEERCIEAFA 241 DAENPFDTQQ YVLCSLDFLR KSRKRFEQAL EGEWDLLVVD EAHHLEWSQD KPSREYQVVE 301 GLAERTPGVL LLTATPEQLG RESHFARLRL LDPDRFYDYE AFVEEEEQYA PVADAITSLF 361 TGEKLPNDAK NQITELLSEQ DVEPLFRIIE SNSDEEDKAS ARQELIDNLM DRHGTGRVLF 421 RNTRAAIKGF PARNVHLMPM DIPQQYTTSM RVAGMIGGKM SSEARAMKNL YPEEIFQEFE 481 GDESSWWQFD SRVNWLLEKV TEKRSEKILV IASRASTALQ LEQALREREG IRATVFHEGM 541 SILERDKAAA YFAQEEGGAQ VLICSEIGSE GRNFQFANQL VMFDLPFNPD LLEQRIGRLD 601 RIGQNRDIDI HVPYLKGTSQ AILARWFDEG LNAFAETCPT GRAVYDKYSD ALIEILASGD 661 TSELDDIIEE SAKMNKQLKS QLEQGRDRLL EMHSNGGEKA QQIVEKISST DGDTNLVTFA 721 LSLFDTIGLN QDDKGENALV VTPSEHMMVP SYPGLPYEGA TITFDRETAL SREDMHFISW 781 EHPMIQGGID LLMSEGVGTS AVSLLKNKAL PVGTILLELI YAVDAQAPKR SGIARFLPKT 841 PIRLMMDARG NDLSAQVEFE SFNRQLSPVN RHLGSKLVTS VQKDVHRLIE AGDGLVEQKV 901 EEVRKQAQQD MQHSLNAELE RLQALKAVNP NIRDEEIETI DAQIKELTGY INQAQVQLDS 961 LRLIVVSHN //