LOCUS       ALR14538.1               969 aa    PRT              BCT 02-SEP-2016
DEFINITION  Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 ATP-
            dependent helicase protein.
ACCESSION   CP009977-64
PROTEIN_ID  ALR14538.1
SOURCE      Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759
  ORGANISM  Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759
            Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;
            Vibrionaceae; Vibrio.
REFERENCE   1  (bases 1 to 3248023)
  AUTHORS   Lee,H. and Church,G.M.
  TITLE     Vibrio natriegens genome v1.0
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3248023)
  AUTHORS   Lee,H. and Church,G.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-NOV-2014) Genetics, Harvard Medical School, 77 Avenue
            Louis Pasteur, NRB 233, Boston, MA 02115, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: RS HGAP v. 3
            Assembly Name          :: Vnat1.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 96.48x
            Sequencing Technology  :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 11/24/2014 10:39:19
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 2.9 (rev. 452286)
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 4,665
            CDS                          :: 4,459
            Pseudo Genes                 :: 42
            rRNAs                        :: 34 (5S, 16S, 23S)
            tRNAs                        :: 129
            ncRNA                        :: 1
            Frameshifted Genes           :: 10
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM
                     759"
                     /mol_type="genomic DNA"
                     /strain="ATCC 14048"
                     /isolation_source="salt marsh mud"
                     /culture_collection="ATCC:14048"
                     /type_material="type strain of Vibrio natriegens"
                     /db_xref="taxon:1219067"
                     /chromosome="1"
                     /country="USA"
                     /collection_date="27-Feb-2012"
     protein         /locus_tag="PN96_00435"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_004735918.1"
                     /note="transcription regulator that activates
                     transcription by stimulating RNA polymerase (RNAP)
                     recycling in case of stress conditions such as supercoiled
                     DNA or high salt concentrations. Probably acts by
                     releasing the RNAP, when it is trapped or immobilized on
                     tightly supercoiled DNA; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /transl_table=11
BEGIN
        1 MTFALGQRWI SDTESDLGLG TVVAMDARTV TLMFSASEEN RVYARNDAPV TRVTFNVGDV
       61 IDCQEGWSLK VEEVLEDEGL YTYFGTREDT QETAVVLREI FLSNQIRFNK PQDKLYAGQI
      121 DRMDNFVLRY RALTNQFEQH KSPMRGLCGM RAGLIPHQLY IAHEVGRRHA PRVLLADEVG
      181 LGKTIEAGMI IHQQVLSGRA ERILIVVPET LQHQWLVEMM RRFNLHFSIF DEERCIEAFA
      241 DAENPFDTQQ YVLCSLDFLR KSRKRFEQAL EGEWDLLVVD EAHHLEWSQD KPSREYQVVE
      301 GLAERTPGVL LLTATPEQLG RESHFARLRL LDPDRFYDYE AFVEEEEQYA PVADAITSLF
      361 TGEKLPNDAK NQITELLSEQ DVEPLFRIIE SNSDEEDKAS ARQELIDNLM DRHGTGRVLF
      421 RNTRAAIKGF PARNVHLMPM DIPQQYTTSM RVAGMIGGKM SSEARAMKNL YPEEIFQEFE
      481 GDESSWWQFD SRVNWLLEKV TEKRSEKILV IASRASTALQ LEQALREREG IRATVFHEGM
      541 SILERDKAAA YFAQEEGGAQ VLICSEIGSE GRNFQFANQL VMFDLPFNPD LLEQRIGRLD
      601 RIGQNRDIDI HVPYLKGTSQ AILARWFDEG LNAFAETCPT GRAVYDKYSD ALIEILASGD
      661 TSELDDIIEE SAKMNKQLKS QLEQGRDRLL EMHSNGGEKA QQIVEKISST DGDTNLVTFA
      721 LSLFDTIGLN QDDKGENALV VTPSEHMMVP SYPGLPYEGA TITFDRETAL SREDMHFISW
      781 EHPMIQGGID LLMSEGVGTS AVSLLKNKAL PVGTILLELI YAVDAQAPKR SGIARFLPKT
      841 PIRLMMDARG NDLSAQVEFE SFNRQLSPVN RHLGSKLVTS VQKDVHRLIE AGDGLVEQKV
      901 EEVRKQAQQD MQHSLNAELE RLQALKAVNP NIRDEEIETI DAQIKELTGY INQAQVQLDS
      961 LRLIVVSHN
//