LOCUS       ALJ16725.1               963 aa    PRT              BCT 14-OCT-2015
DEFINITION  Sphingopyxis macrogoltabida transposase protein.
ACCESSION   CP009431-85
PROTEIN_ID  ALJ16725.1
SOURCE      Sphingopyxis macrogoltabida (Sphingomonas macrogoltabidus)
  ORGANISM  Sphingopyxis macrogoltabida
            Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
            Sphingomonadaceae; Sphingopyxis.
REFERENCE   1  (bases 1 to 151240)
  AUTHORS   Ohtsubo,Y., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A.,
            Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F.
  TITLE     Complete genome sequence of a mutant derivative (NBRC15033) of
            polyethylene glycol-degrading strain Sphingopyxis macrogoltabidus
            strain 203
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 151240)
  AUTHORS   Ohtsubo,Y. and Kawai,F.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-OCT-2015) Department of Environmental Life Sciences,
            Graduate School of Life Sciences, Tohoku University, Katahira
            2-1-1, Sendai, Miyagi 980-8577, Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genomes Automatic
            Annotation Pipeline Group. Information about the Pipeline can be
            found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be
            aware that the annotation is done automatically with little or no
            manual curation.
            Whole genome shotgun sequencing was performed at NITE. Finishing
            was conducted at Tohoku University with the aid of GenoFinisher,
            AceFileViewer, and ShortReadManager software
            (http://www.ige.tohoku.ac.jp/joho/gf_e/index.php). Autoannotation
            was conducted using PGAP and MiGAP, and PGAP annotation was curated
            by referencing to the MiGAP annotation with the aid of annotation
            support tool of GenomeMatcher software. Strain 203 is available
            from NBRC culture collection (http://www.nbrc.nite.go.jp/e/).
            
            Annotation was added by the NCBI Prokaryotic Genomes Automatic
            Annotation Pipeline Group. Information about the Pipeline can be
            found here:
            http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html.
            
            Annotation modified by submitter.
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: Newbler v. 2.8
            Genome Coverage       :: 60x
            Sequencing Technology :: Illumina HiSeq; 454 Titanium
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 09/15/2014 14:23:18
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 2.7 (rev. 445095)
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 4,984
            CDS                          :: 4,889
            Pseudo Genes                 :: 33
            rRNAs                        :: 3 (5S, 16S, 23S)
            tRNAs                        :: 58
            ncRNA                        :: 1
            Frameshifted Genes           :: 27
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Sphingopyxis macrogoltabida"
                     /mol_type="genomic DNA"
                     /strain="203"
                     /isolation_source="soil"
                     /type_material="type strain of Sphingopyxis
                     macrogoltabida"
                     /db_xref="taxon:33050"
                     /plasmid="unnamed"
                     /country="Japan"
                     /collection_date="01-Jan-1975"
     protein         /locus_tag="LH19_28440"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_010512303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MPRRVTLTDR QREALLHLPV DQGELLRHYT LSDEDLGHIR QRRRAHNRFG FALQLCVLRY
       61 PGRVLAPGEL IPAQVSDFIA AQLGLTSDDL LLYAAREETR HEHLADLRRI YGYRSFSGRG
      121 ARDLREWIAR EAEAATSNED LARRFVAECR RTRTILPGSS TIERLCADAL VEAERRIEDL
      181 IAHRITPTLS ENLAHLLEDT VDGRVTRFVW LRQFEVGANS AAANRLMDRL EYLQRFDLPA
      241 DLLDGVPAHR VTRLRRQGER YYADGMRDLP EDRRLAILAV CTLEWRSSLA DVIVETHDRI
      301 VGRLYRASER LCNTRIADAK AAVRDTLKSF AEIGGALLGA QDDGTALDGI IATGPGWERF
      361 RTLVATASAL TNVLAADPLS RVLDGYHRFR LYAPRMLRLL DMQAAPIATP LLAAVAMLRN
      421 GIKVDPPVDF LRPNSKWHRH LRAEPSGDHR LWEIAVLFHI RDAFRSGDIW LAGSRRYGDL
      481 KQLLVPPQAI EQTARLAVPL RPGEWLAERR ARLDTRLKEF GRAARTGTIP GGIIENGKLH
      541 IDKLRADTPE GAEDLVLDLY QQLPPARITD LLLEVDERTG FSEAFTHLRT GAPCSDRIGL
      601 MNVLLAEGVN LGLRKMAAAT NTHSFWELLR IARWHVEGSA YDRALAMIVE AHAALPMAAF
      661 WGQGQSASSD GQFFLATEQG EAMNLINAKY GNVPGLKGYS HVSDQYAPFA TQVIPATVSE
      721 APYILDGLLM NDAGRRVRQH FADTGGFTDH VFAACALLGY RFAPRIRDLP QKRLYAFTPN
      781 ATPANVRALV GGKINEPLIE RNWPDILRIM ATIAAGIVAP SQILRKLASY PRQNELALAL
      841 REVGRIERTL FMIDWILDAG LQRQAQIGLN KGEAHHALKR AISFHRRGEI RDRSGEGQHY
      901 RIAGMNLLAA IIIFWNTMKL GEVVNTRAAS GTHIAPDLLA HVSPLGWEHI NLTGEYRWPK
      961 SLA
//