LOCUS ALJ16636.1 817 aa PRT BCT 14-OCT-2015 DEFINITION Sphingopyxis macrogoltabida methylase protein. ACCESSION CP009430-378 PROTEIN_ID ALJ16636.1 SOURCE Sphingopyxis macrogoltabida (Sphingomonas macrogoltabidus) ORGANISM Sphingopyxis macrogoltabida Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 422455) AUTHORS Ohtsubo,Y., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete genome sequence of a mutant derivative (NBRC15033) of polyethylene glycol-degrading strain Sphingopyxis macrogoltabidus strain 203 JOURNAL Unpublished REFERENCE 2 (bases 1 to 422455) AUTHORS Ohtsubo,Y. and Kawai,F. TITLE Direct Submission JOURNAL Submitted (05-OCT-2015) Department of Environmental Life Sciences, Graduate School of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai, Miyagi 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genomes Automatic Annotation Pipeline Group. Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be aware that the annotation is done automatically with little or no manual curation. Whole genome shotgun sequencing was performed at NITE. Finishing was conducted at Tohoku University with the aid of GenoFinisher, AceFileViewer, and ShortReadManager software (http://www.ige.tohoku.ac.jp/joho/gf_e/index.php). Autoannotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. Strain 203 is available from NBRC culture collection (http://www.nbrc.nite.go.jp/e/). Annotation was added by the NCBI Prokaryotic Genomes Automatic Annotation Pipeline Group. Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Annotation modified by submitter. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8 Genome Coverage :: 60x Sequencing Technology :: Illumina HiSeq; 454 Titanium ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 09/15/2014 14:23:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 2.7 (rev. 445095) Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 4,984 CDS :: 4,889 Pseudo Genes :: 33 rRNAs :: 3 (5S, 16S, 23S) tRNAs :: 58 ncRNA :: 1 Frameshifted Genes :: 27 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis macrogoltabida" /mol_type="genomic DNA" /strain="203" /isolation_source="soil" /type_material="type strain of Sphingopyxis macrogoltabida" /db_xref="taxon:33050" /plasmid="unnamed" /country="Japan" /collection_date="01-Jan-1975" protein /locus_tag="LH19_27940" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_017183336.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MPNLFEAADA AERRASEILA QKLGADEPIT RRVLNAAMTE AFGGTDADGK WTQRDSFELL 61 EHALAHHLLT DPYPLRELGD VVAACDLNDR LPTQTVRSED QLEWQQFSTP VDLAAVAVLL 121 ANVQQGDIIL EPSAGNGLLV AQCRGHAGLQ LNEYAHARRT RLALAFPDAT ITGHDGATIN 181 SALAASPRPT VILMNPPFSR SVGIGADSHA AVRHLQAALR RLQPGGRLVA IMPDWFGRNA 241 RMRDLFETTL REVSVRSSVR LEKCYLKHGT SIAVRLFVID KMPGAAMTAT IQSSSIRDLI 301 QSLKVHPRGA VSAAPTSTPR RASNPSLFRA LKSSPAKPRP FHAPVRNNVL PVGYATLDTP 361 APLLEQVGVY LPYRPSRIEF ETAGEHPTAL VESVAMGSIA APIPGYLPHL PERTVSERLL 421 SASQLETVVY AGHAWSQYLP GKFKPSKEGV GLEEAEDGRA YRKGYFLGDG TGAGKGRQIA 481 ACILDNWLQG RRRSIWVSKN EALLEDARRD WTGLGGLAAD IQPLSNWKID QAIPLEQGVL 541 FVTYPTLRSA RGEHARLQQI IEWADGDFEG VIGFDEAHEM GGVAGGEGAL GRKQEGSAQG 601 VCGVLLQNHL PDARVLYASA TGASDVNNLA YAVRLGLWGP ETAFAGREQF IAEIRKGGIA 661 AMELVARDLK ALGLYTARAL SFAGVEYDVA RHTLTPDQIA IYDSYADAWA IIHRNMERAL 721 ELTAIVDSIE NATLNSGAKA SARSRFESTK QRFFGQLLLS MKLPTVIAAA EDHLASGQSV 781 VLQLVTTAES ILNRRLAELS PEERADLEID LSPREYV //