LOCUS ALJ16472.1 647 aa PRT BCT 14-OCT-2015 DEFINITION Sphingopyxis macrogoltabida fatty-acyl-CoA synthase protein. ACCESSION CP009430-214 PROTEIN_ID ALJ16472.1 SOURCE Sphingopyxis macrogoltabida (Sphingomonas macrogoltabidus) ORGANISM Sphingopyxis macrogoltabida Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis. REFERENCE 1 (bases 1 to 422455) AUTHORS Ohtsubo,Y., Nagata,Y., Numata,M., Tsuchikane,K., Hosoyama,A., Yamazoe,A., Tsuda,M., Fujita,N. and Kawai,F. TITLE Complete genome sequence of a mutant derivative (NBRC15033) of polyethylene glycol-degrading strain Sphingopyxis macrogoltabidus strain 203 JOURNAL Unpublished REFERENCE 2 (bases 1 to 422455) AUTHORS Ohtsubo,Y. and Kawai,F. TITLE Direct Submission JOURNAL Submitted (05-OCT-2015) Department of Environmental Life Sciences, Graduate School of Life Sciences, Tohoku University, Katahira 2-1-1, Sendai, Miyagi 980-8577, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genomes Automatic Annotation Pipeline Group. Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be aware that the annotation is done automatically with little or no manual curation. Whole genome shotgun sequencing was performed at NITE. Finishing was conducted at Tohoku University with the aid of GenoFinisher, AceFileViewer, and ShortReadManager software (http://www.ige.tohoku.ac.jp/joho/gf_e/index.php). Autoannotation was conducted using PGAP and MiGAP, and PGAP annotation was curated by referencing to the MiGAP annotation with the aid of annotation support tool of GenomeMatcher software. Strain 203 is available from NBRC culture collection (http://www.nbrc.nite.go.jp/e/). Annotation was added by the NCBI Prokaryotic Genomes Automatic Annotation Pipeline Group. Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Annotation modified by submitter. ##Genome-Assembly-Data-START## Assembly Method :: Newbler v. 2.8 Genome Coverage :: 60x Sequencing Technology :: Illumina HiSeq; 454 Titanium ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 09/15/2014 14:23:18 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 2.7 (rev. 445095) Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 4,984 CDS :: 4,889 Pseudo Genes :: 33 rRNAs :: 3 (5S, 16S, 23S) tRNAs :: 58 ncRNA :: 1 Frameshifted Genes :: 27 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Sphingopyxis macrogoltabida" /mol_type="genomic DNA" /strain="203" /isolation_source="soil" /type_material="type strain of Sphingopyxis macrogoltabida" /db_xref="taxon:33050" /plasmid="unnamed" /country="Japan" /collection_date="01-Jan-1975" protein /locus_tag="LH19_27100" /note="product name was assigned by KAAS; K00666" /transl_table=11 BEGIN 1 MGSTGRESRG WVAGAGPGSP FMRGRIEGIA DVEAIESVPA RSVLAGETVY DCLAAAARID 61 PAKTAIVALA PGGSGDVDAA LTYGDYLRQS TAAANLFHHL AGDRRSVVAL MLPIVPEALV 121 AAWGATAAGV VNPINPHLEP ALVISILKAV GATALVTTTA HGPSAADHLA EIVAAVPGLD 181 HVFLVGGDDP ASDFSGTIES RNGDALDFTP EGTWDSEAMY LPTGGTTAVP KLARLTQGGM 241 ALSGWIAGAV MGAEEDEVIG LGMPLFHVGG MLMLALRAAV LGQTVVLLSP AGFRDRGVVG 301 NFWPIVKMHG ITSLIATPTT AAALHASPGA DHEGHPIRTF SSGGSTIPLE LGRAFPERFG 361 IELREVWGAT EFHGFLGCMP NAMPPLIGSV GVRTPWHDIK AVEVDEGNRF VREMAPGEQG 421 VIIGSGPCLA LGYVEAAADR QFFVEGGPGG RSWGSSGDLG RVGADQFVWI DGRAKDVIIR 481 GGHNIDPALI EEALVRRPDI LLAAAVGLPD REKGELPLAF VEAAPGAVVD EAELVQYCRT 541 AIPERAACPV AVVVLPGLPL TPVGKIFKPA LRELAIRRAV GAALGAHYDG EIAGIEIVTG 601 KARPDVVVRI AEADAALRAR LSTVLQGFAF SARVEPGTAE AQAETVT //