LOCUS       AKO89617.1               728 aa    PRT              BCT 27-AUG-2015
DEFINITION  Pseudomonas aeruginosa DSM 50071 = NBRC 12689 DNA-dependent
            helicase II protein.
ACCESSION   CP012001-5582
PROTEIN_ID  AKO89617.1
SOURCE      Pseudomonas aeruginosa DSM 50071 = NBRC 12689
  ORGANISM  Pseudomonas aeruginosa DSM 50071 = NBRC 12689
            Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
            Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6317050)
  AUTHORS   Nakano,K., Terabayashi,Y., Shiroma,A., Shimoji,M., Tamotsu,H.,
            Ashimine,N., Ohki,S., Shinzato,M., Teruya,K., Satou,K. and
            Hirano,T.
  TITLE     First Complete Genome Sequence of Pseudomonas aeruginosa (Schroeter
            1872) Migula 1900 (DSM 50071T), Determined Using PacBio
            Single-Molecule Real-Time Technology
  JOURNAL   Genome Announc 3 (4), e00932-15 (2015)
   PUBMED   26294631
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6317050)
  AUTHORS   Nakano,K., Terabayashi,Y., Shiroma,A., Shimoji,M., Tamotsu,H.,
            Ashimine,N., Ohki,S., Shinzato,M., Teruya,K., Satou,K. and
            Hirano,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-JUL-2015) Research and Development Division, Okinawa
            Institute of Advanced Sciences, Okinawa Biotechnology Business
            Support Center, Suite109, 5-1, Suzaki, Uruma, Okinawa 904-2234,
            Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: HGAP3 v. 2.3.0
            Genome Coverage       :: 843x
            Sequencing Technology :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 07/02/2015 10:33:57
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 2.10
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 5,805
            CDS                          :: 5,710
            Pseudo Genes                 :: 18
            CRISPR Arrays                :: 3
            rRNAs                        :: 12 (5S, 16S, 23S)
            tRNAs                        :: 64
            ncRNA                        :: 1
            Frameshifted Genes           :: 11
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Pseudomonas aeruginosa DSM 50071 = NBRC 12689"
                     /mol_type="genomic DNA"
                     /strain="DSM 50071"
                     /culture_collection="DSM:50071"
                     /type_material="type strain of Pseudomonas aeruginosa"
                     /db_xref="taxon:1123015"
     protein         /gene="uvrD"
                     /locus_tag="PA50071_28380"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_003096872.1"
                     /note="unwinds DNA duplexes with 3' to 5' polarity with
                     respect to the bound strand and initiates unwinding most
                     effectively when a single-stranded region is present;
                     involved in the post-incision events of nucleotide
                     excision repair and methyl-directed mismatch repair;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MNDDLSLLLN SLNDPQRQAV AAPLGRQLVL AGAGSGKTRV LVHRIAWLIQ VEHASPYSIL
       61 SVTFTNKAAA EMRHRIEQLL GINPAGMWVG TFHGLAHRLL RAHWREAGLS ENFQILDSDD
      121 QQRLVKRVIR ELGLDEQRWP ARQAQWFING QKDEGLRPQH IQPGGDLFLA TMLKIYEAYE
      181 AACARAGVID FSELLLRALD LWRDHPGVLE HYQRRFRHIL VDEFQDTNAV QYAWLRILAK
      241 GGDSLMVVGD DDQSIYGWRG ARIENIQQFS DDFADAEVIR LEQNYRSTAS ILKAANALIA
      301 NNQGRLGKEL WTDGEDGESL SLYAAFNEHD EARYVVESIE SALKGGLARS EIAILYRSNA
      361 QSRVLEEALL REKIPYRIYG GQRFFERAEI KNAMAYLRLL DGRGNDAALE RVVNVPARGI
      421 GEKTVESIRE FARGNDVSMW EAIRLMIANK VLPGRAASAL TGFVELIENL SAKVMDMPLH
      481 LMTQTVIEQS GLISYHKEEK GEKGQARVEN LEELVSAARA FENSEEEEDL TPLQAFLSHA
      541 SLEAGETQAD AHEDSVQLMT LHSAKGLEFP LVFLVGMEEG LFPHKMSLEE SGRLEEERRL
      601 AYVGVTRAMQ RLVLTYAETR RLYGSETYNK VSRFIREIPP ALIQEVRLSN TVSRPYGGTS
      661 RNAGGSLFSG AGVPETPFSL GQRVRHALFG EGTILNFEGA GAQARVQVNF ESEGSKWLML
      721 GYAKLEAL
//