LOCUS AKO88343.1 427 aa PRT BCT 27-AUG-2015 DEFINITION Pseudomonas aeruginosa DSM 50071 = NBRC 12689 porin protein. ACCESSION CP012001-4261 PROTEIN_ID AKO88343.1 SOURCE Pseudomonas aeruginosa DSM 50071 = NBRC 12689 ORGANISM Pseudomonas aeruginosa DSM 50071 = NBRC 12689 Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 6317050) AUTHORS Nakano,K., Terabayashi,Y., Shiroma,A., Shimoji,M., Tamotsu,H., Ashimine,N., Ohki,S., Shinzato,M., Teruya,K., Satou,K. and Hirano,T. TITLE First Complete Genome Sequence of Pseudomonas aeruginosa (Schroeter 1872) Migula 1900 (DSM 50071T), Determined Using PacBio Single-Molecule Real-Time Technology JOURNAL Genome Announc 3 (4), e00932-15 (2015) PUBMED 26294631 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 6317050) AUTHORS Nakano,K., Terabayashi,Y., Shiroma,A., Shimoji,M., Tamotsu,H., Ashimine,N., Ohki,S., Shinzato,M., Teruya,K., Satou,K. and Hirano,T. TITLE Direct Submission JOURNAL Submitted (01-JUL-2015) Research and Development Division, Okinawa Institute of Advanced Sciences, Okinawa Biotechnology Business Support Center, Suite109, 5-1, Suzaki, Uruma, Okinawa 904-2234, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP3 v. 2.3.0 Genome Coverage :: 843x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 07/02/2015 10:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 2.10 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 5,805 CDS :: 5,710 Pseudo Genes :: 18 CRISPR Arrays :: 3 rRNAs :: 12 (5S, 16S, 23S) tRNAs :: 64 ncRNA :: 1 Frameshifted Genes :: 11 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Pseudomonas aeruginosa DSM 50071 = NBRC 12689" /mol_type="genomic DNA" /strain="DSM 50071" /culture_collection="DSM:50071" /type_material="type strain of Pseudomonas aeruginosa" /db_xref="taxon:1123015" protein /locus_tag="PA50071_21610" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_012077040.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MSTSLPQAAR SVRSSRSTTL TTTAVVLAGI APLGNAAGFL EDSKASLETR NFYMNRDFRD 61 GPGQSKREEW AQGFILNLQS GYTQGTVGFG LDAMGMLGVK LDSGRGRSGT GLLPKDSDGR 121 APDTYSKLGL TAKVKVSQSE LKVGTLIPKL PSVQPNNGRI FPQIFEGALL TSKEIKDLGF 181 TAGRLEKTKI RDSSDSEDLA LNDKNGRFAG VSADHFDLGG LDYKLTDQLT ASYHYSNLQD 241 VYRQHFVGLL HSWPIGPGEL TSDLRFARST DSGSAKAGGI DNKSLNGMFT YSLGNHAFGA 301 AWQRMNGDDA FPYLEGSNPY LVNFVQVNDF AGPKERSWQL RYDYDFVGLG IPGLTFMTRY 361 VKGDNVELAG QRGEGREWER NTELQYVFQS GALKNLGIRW RNATFRSNFT RDIDENRLIV 421 SYTLPIW //