LOCUS       AKO87645.1               247 aa    PRT              BCT 27-AUG-2015
DEFINITION  Pseudomonas aeruginosa DSM 50071 = NBRC 12689 flagellar
            biosynthesis sigma factor protein.
ACCESSION   CP012001-3540
PROTEIN_ID  AKO87645.1
SOURCE      Pseudomonas aeruginosa DSM 50071 = NBRC 12689
  ORGANISM  Pseudomonas aeruginosa DSM 50071 = NBRC 12689
            Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
            Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 6317050)
  AUTHORS   Nakano,K., Terabayashi,Y., Shiroma,A., Shimoji,M., Tamotsu,H.,
            Ashimine,N., Ohki,S., Shinzato,M., Teruya,K., Satou,K. and
            Hirano,T.
  TITLE     First Complete Genome Sequence of Pseudomonas aeruginosa (Schroeter
            1872) Migula 1900 (DSM 50071T), Determined Using PacBio
            Single-Molecule Real-Time Technology
  JOURNAL   Genome Announc 3 (4), e00932-15 (2015)
   PUBMED   26294631
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6317050)
  AUTHORS   Nakano,K., Terabayashi,Y., Shiroma,A., Shimoji,M., Tamotsu,H.,
            Ashimine,N., Ohki,S., Shinzato,M., Teruya,K., Satou,K. and
            Hirano,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-JUL-2015) Research and Development Division, Okinawa
            Institute of Advanced Sciences, Okinawa Biotechnology Business
            Support Center, Suite109, 5-1, Suzaki, Uruma, Okinawa 904-2234,
            Japan
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: HGAP3 v. 2.3.0
            Genome Coverage       :: 843x
            Sequencing Technology :: PacBio
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 07/02/2015 10:33:57
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 2.10
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 5,805
            CDS                          :: 5,710
            Pseudo Genes                 :: 18
            CRISPR Arrays                :: 3
            rRNAs                        :: 12 (5S, 16S, 23S)
            tRNAs                        :: 64
            ncRNA                        :: 1
            Frameshifted Genes           :: 11
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Pseudomonas aeruginosa DSM 50071 = NBRC 12689"
                     /mol_type="genomic DNA"
                     /strain="DSM 50071"
                     /culture_collection="DSM:50071"
                     /type_material="type strain of Pseudomonas aeruginosa"
                     /db_xref="taxon:1123015"
     protein         /gene="fliA"
                     /locus_tag="PA50071_17970"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_016561722.1"
                     /note="sigma factors are initiation factors that promote
                     the attachment of RNA polymerase to specific initiation
                     sites and are then released; this sigma factor directs
                     late flagellar biosynthesis genes; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /transl_table=11
BEGIN
        1 MTAASGVRMY SKAQAQNSQE QLIQRYAPLV KRIAYHLLGR LPASVQVEDL MQAGMIGLLE
       61 AAKKYDAGKG ASFETYAGIR IRGAMLDEVR KGDWAPRSVH RNTRMVTDAI RAIEARTGRD
      121 AKDHEVAAEL QLSLEDYYGI LSDTQGSRLY SFDDLLQDGE HGLPEDTSLS HNEPIHGLLD
      181 ERFQAALADA IAKLPERERL VLALYYDEEL NLKEIGEVLG VSESRVSQLH SQCAARLRAR
      241 LADWRSA
//