LOCUS AKO86689.1 4991 aa PRT BCT 27-AUG-2015
DEFINITION Pseudomonas aeruginosa DSM 50071 = NBRC 12689 peptide
synthase protein.
ACCESSION CP012001-2557
PROTEIN_ID AKO86689.1
SOURCE Pseudomonas aeruginosa DSM 50071 = NBRC 12689
ORGANISM Pseudomonas aeruginosa DSM 50071 = NBRC 12689
Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
Pseudomonadaceae; Pseudomonas.
REFERENCE 1 (bases 1 to 6317050)
AUTHORS Nakano,K., Terabayashi,Y., Shiroma,A., Shimoji,M., Tamotsu,H.,
Ashimine,N., Ohki,S., Shinzato,M., Teruya,K., Satou,K. and
Hirano,T.
TITLE First Complete Genome Sequence of Pseudomonas aeruginosa (Schroeter
1872) Migula 1900 (DSM 50071T), Determined Using PacBio
Single-Molecule Real-Time Technology
JOURNAL Genome Announc 3 (4), e00932-15 (2015)
PUBMED 26294631
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 6317050)
AUTHORS Nakano,K., Terabayashi,Y., Shiroma,A., Shimoji,M., Tamotsu,H.,
Ashimine,N., Ohki,S., Shinzato,M., Teruya,K., Satou,K. and
Hirano,T.
TITLE Direct Submission
JOURNAL Submitted (01-JUL-2015) Research and Development Division, Okinawa
Institute of Advanced Sciences, Okinawa Biotechnology Business
Support Center, Suite109, 5-1, Suzaki, Uruma, Okinawa 904-2234,
Japan
COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (released 2013). Information about the Pipeline can be
found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
##Genome-Assembly-Data-START##
Assembly Method :: HGAP3 v. 2.3.0
Genome Coverage :: 843x
Sequencing Technology :: PacBio
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Date :: 07/02/2015 10:33:57
Annotation Pipeline :: NCBI Prokaryotic Genome Annotation
Pipeline
Annotation Method :: Best-placed reference protein set;
GeneMarkS+
Annotation Software revision :: 2.10
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;
repeat_region
Genes :: 5,805
CDS :: 5,710
Pseudo Genes :: 18
CRISPR Arrays :: 3
rRNAs :: 12 (5S, 16S, 23S)
tRNAs :: 64
ncRNA :: 1
Frameshifted Genes :: 11
##Genome-Annotation-Data-END##
FEATURES Qualifiers
source /organism="Pseudomonas aeruginosa DSM 50071 = NBRC 12689"
/mol_type="genomic DNA"
/strain="DSM 50071"
/culture_collection="DSM:50071"
/type_material="type strain of Pseudomonas aeruginosa"
/db_xref="taxon:1123015"
protein /locus_tag="PA50071_13025"
/inference="EXISTENCE: similar to AA
sequence:RefSeq:WP_004343767.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/transl_table=11
BEGIN
1 MDMSVALRVA RRFITLPLDK RKLYLAKMQE EGVTPANLPI PEVASAFERI PLSYAQERQW
61 FLWQMDPQSA AYNIPSALRL RGELDVEALS ASLGAIVERH QSLRTVFVED EQLDGFRQQV
121 LASVDVPVPV TLAGDDDAQA QIRAFVESET QQPFDLRNGP LLRARLLRLA ADDHVLTLTI
181 HHVAADGWSM RVLVEELIAL YGARRQGVEA TLPDLPIQYA DYAIWQRHWL EAGERERQLE
241 YWMARLGGGQ SVLELPTDRQ RPALPSYRGA RHELQLPQAL GRQLQALAQR EGTTLFMLLL
301 ASFQALLHRY SGQDEIRVGV PVANRNRVET ERLIGFFVNT QVLRADLDAQ MPFLDLLQQT
361 RVAALGAQSH QDLPFEQLVE ALQPERSLSH SPLFQAMYNH QNLGSAGRQS LAAQLPGLSV
421 EDLSWGAHSA QFDLTLDTYE SEQGVHAEFT YATDLFEAAT VERLARHWRN LLEAVVAEPR
481 RRLGDLPLLD AEERATLLQR SRLPASEYPA GQGVHRLFEA QAGLTPDAPA LLFGEERLSY
541 AELNALANRL AWRLREEGVG SDVLVGIALE RGVPMVVALL AVLKAGGAYV PLDPQYPADR
601 LQYMIDDSGL RLLLSQQSVL ARLPQSDGLQ SLLLDDLERL VHGYPAENPD LPEAPDSLCY
661 AIYTSGSTGQ PKGVMVRHRA LTNFVCSIAR QPGMLARDRL LSVTTFSFDI FGLELYVPLA
721 RGASMLLASR EQAQDPEALL DLVERQGVTV LQATPATWRM LCDSERVDLL RGCTLLCGGE
781 ALAEDLAARM RGLSASTWNL YGPTETTIWS ARFRLGEEAR PFLGGPLENT ALYILDSEMN
841 PCPPGVAGEL LIGGDGLARG YHRRPGLTAE RFLPDPFAAD GSRLYRTGDQ ARYRADGVIE
901 YLGRIDHQVK IRGFRIELGE IETRLLEQDS VREAVVVAQP GVAGPTLVAY LVPTEAALVD
961 AESARQQELR SALKNSLLAV LPDYMVPAHM LLLENLPLTP NGKINRKALP LPDASAVRDA
1021 HVAPEGELER AMAAIWSEVL KLGHIGRDDN FFELGGHSLL VTQVVSRVRR RLDLQVPLRT
1081 LFEHSTLRAY AQAVAQLAPA AQGGIVRCAR DASPQLSFAQ ERQWFIWRLD PHSAAYNIPV
1141 ALRLKGPLRR DALQGALDLL VQRHETLRTT FVEHDGAPRQ VIHPTLPIAI EERRPPVAGE
1201 DLKGLVETEA HRPFDLQRGP LLRVLLLPLA TDECVLVLTL HHIIADGWSM QVLVDELIRV
1261 YAALRHDEPP ALAELPIQYA DFAAWQRQWM DGGERERQLG YWVSRLGGEQ PLLELPSDRP
1321 RPQQQSHRGR RIGIPLPAEL AEALRRLAQA EQGTLFMLLL ASFQALLHRY SGQNDIRVGV
1381 PIANRNREET EGLIGFFVNT QVLRAELDGQ LPFRELLRQV RRAVVEAQGH QDLPFEQLVD
1441 ALQPERSLSH APLFQVMYNH QRDDHRGSRF ASLGELEVED LAWDVQTAQF DLTLDTYESS
1501 NGLLAELTYA TDLFDASSAE RIAGHWLNLL RSIVARPEAR IAELKLLDEA EARADLLQWN
1561 PGPQDFTPAS CLHRLIERQA AERPRATAVV YGERALDYGE LNLRANRLAH RLIELGVGPD
1621 VLVGLAAERS LEMIVGLLAI LKAGGAYVPL DPRYPSDRLG YMIEDSGIRL LLTQRAARER
1681 LPLGEGLPCL LLDAEHEWAG YPESDPQSAV GVDNLAYVIY TSGSTGKPKG TLLPHGNVLR
1741 LFDATRHWFG FSADDAWSLF HSYAFDFSVW EIFGALLHGG RLVIVPYETS RSPEDFLRLL
1801 CRERVTVLNQ TPSAFKQLMQ VACAGQEVPP LALRHVVFGG EALEVQALRP WFERFGDRAP
1861 RLVNMYGITE TTVHVTYRPL SLADLDGGAA SPIGEPIPDL SWYLLDAGLN PVPRGCIGEL
1921 YVGGAGLARG YLNRPELSCT RFVADPFSTT GGRLYRTGDL ARYRCDGVVE YVGRIDHQVK
1981 IRGFRIELGE IEARLLAQPG VAEAVVLPHE GPGATQLVGY VVTQAAPSDP AALRDTLRQA
2041 LKASLPEHMV PAHLLFLERL PLTANGKLDR RALPAPDASR LQRDYTAPRS ELEQRLAAIW
2101 ADVLKLGRVG LDDNFFELGG DSIISIQVVS RARQAGIRLA PRDLFLHQTI RGLAGVAVEG
2161 RGLACAEQGP ISGSTPLLPI QQMFFELDIP RRQHWNQSVL LEPGQALDGT LLETALQALL
2221 AHHDALRLGF RLEDGTWRAE HRAVEAGEVL LWQQSVADGQ ALEALAEQVQ RSLDLGSGPL
2281 LRALLATLGD GSQRLLLVIH HLVVDGVSWR ILLEDLQTAY RQLQAGQAVA LPAKTSAFKA
2341 WAERLQAHAR DGGLEGERGY WLAQLEGVST ELPCDDREGA QSVRHVRSAR TELTEEATRR
2401 LLQEAPAAYR TQVNDLLLTA LARVIGRWTG QADTLIQLEG HGREELFEDI DLTRTVGWFT
2461 SLFPLRLSPV AELGASIKRI KEQLRAIPHK GLGFGALRYL GSAEDRAALA ALPSPRITFN
2521 YLGQFDGSFS ADSSALFRPS ADAAGSERDS DAPLDNWLSL NGQVYAGRLG IDWSFSAARF
2581 SEASILRLAD AYRDELLALI EHCCAADVEG VTPSDFPLAG LDQRQLDALP LAAGEVEDLY
2641 PLSPMQQGML FHSLYQQNSG DYINQMRLDV EGLDPQRFRE AWQAALDAHE VLRSGFLWQG
2701 ALEKPLQLVR KRVEVPFSVH DWRDRADLAE ALDALAAGEA GLGFELAEAP LLRLVLVRTG
2761 ERRHHLIYTN HHILMDGWSN SQLLGEVLQR YRGETPSRSD GRYRDYIAWL QRQDAGRTEA
2821 FWKQRLQRLG EPTLLVPAFA HGVRSAEGHA DRYRQLDVTT SQRLAEFARE QKVTLNTLVQ
2881 AAWLILLQRF TGQDTVAFGA TVSGRPAELR GIEEQIGLFI NTLPVVASPC PEQPLGDWLQ
2941 AVQGENLALR EFEHTPLYDI QRWAGQVGEA LFDNILVFEN YPVSAALAEE TPTDMRIDAL
3001 SNQEQTHYPL TLLVSAGETL ELHYSYSRQA FDEAAIECLA ERLERLLLGM CENPGASLGE
3061 LDSLAVAERY QLLEGWNATA AEYPLQRGVH RLFEEQVERT PTAPALAFGE ERLDYAELNR
3121 RANRLAHALI ERGIGADRLV GVAMERSIEM VVALMAILKA GGAYVPVDPE YPEERQAYML
3181 EDSGVQLLLS QSHLKLPLAQ GVQRIDLDQA DAWLENHAEN NPGVELNGEN LAYVIYTSGS
3241 TGKPKGAGNR HSALSNRLCW MQQAYGLGVG DTVLQKTPFS FDVSVWEFFW PLMSGARLVV
3301 AAPGDHRDPA KLVELINREG VDTLHFVPSM LQAFLQDEDV ASCTSLKRIV CSGEALPADA
3361 QQQVFAKLPQ AGLYNLYGPT EAAIDVTHWT CVEEGKDAVP IGRPIANLAC YILDGNLEPV
3421 PVGVLGELYL AGRGLARGYH QRPGLTAERF VASPFVAGER MYRTGDLARY RADGVIEYAG
3481 RIDHQVKLRG LRIELGEIEA RLLEHPWVRE AAVLAVDGRQ LVGYVVLESE GGDWREALAA
3541 HLATSLPEYM VPAQWLALER MPLSPNGKLD RKALPKIEAE DGLGEYVAPA SEPERQLAAI
3601 WADVLGRERV GVTDNFFALG GDSIVSIQVV SRARQAGLQL SPRDLFQLQN IRKLAERCSA
3661 AAPVAEPASV PDGAVLHNLL PQQVQALPLP HERLEHLYSL SPMQQGMLFL GLNSPDAELY
3721 INQLSIAVDG LDPQRLQRAW SAVAQRHEVL RSGFLWLDQE EPLQFVLADP GLPFEVLDWR
3781 GRAISDEALE QVAQQERRKG FDLGQPPLQR IRLLRLGEDR YQLIWTYHHI LIDGWSTSQL
3841 FGEILELYSG GSLPPAVPYR HYIAWLRARD GKASEAFWRR QLARMDEPTY LADAFNAARE
3901 GYGHQALYTR LDSDATEHLK RFAQSQRVTL NTLVQGAWLL LLSRYSGQRC VSFGATVAGR
3961 PASLEASERI LGLFINTLPV VCEVAPEQCV GDWLRALQDY NLEMREQEYT PLSDIQRWAG
4021 RSGQSLFDSI IVFENHPVDR TLRDWRDDSL RFGEMRSAGL TNFPMDLMVT SDDSGLAIEY
4081 MFLREHFAVA SVERLRTDME GLLAALSGDA ECRLGNIGLP SARVPLADGA CPDRYPLVHQ
4141 RIGEWSRRTP DATALVFDER SHSFAELDAR ANRLAHALVE RGVAADVRVG VALPRGTELV
4201 VALLAVLKAG GAYVPLDLAY PRERLAYLMQ DSGIALLLSE SQALVQLPVP AGVPALALDR
4261 LDLLEHPAQA PQVEVHPANL AYVIYTSGST GLPKGVAVSH GPLAMHIDAV GERYEMTPAD
4321 RELHFMSFAF DGAHERWLTA LGHGGSLLLR DDALWTPEQT YAAMQRHGVT VAAFPPVYLQ
4381 QLAEHAERDG NPPPVRIYCF GGDAVPVAGF ELAKRALKPR YIINGYGPTE TVVTPLIWKA
4441 AMDTECGAAY APIGSFVGER CGYVLDADLN PLPAGVAGEL YLGGVGLARG YLQRPGLSAE
4501 RFVANPFSRA GERLYRTGDL VRQREDGTFD YLGRIDNQVK VRGFRIELGE IEARLQDAGE
4561 VREAVVVARD AASGKQLLGY VVAEDGADAS GLLERLRERL KRDLPEYMVP AHLALLPAMP
4621 LTPNGKIDRK ALPDIDVTAS EAYVAPRNEL ELALAGIWQE VLGIARIGVH DNFFELGGDS
4681 ILSMQVVAKA RALKKLGFSL KLRDLIQKPS IAALSGYDDS AAPPSPILAL NAAVDGCPPL
4741 FCVHAGFGTV FDYEPLARRL NGRRSVLAIQ ARSLLDPNWR DASLQRMAED YVALIRQRQA
4801 EGPYHLLGWS LGGTLGMLMA AELERQGQQV AFLGLLDSYV PGTEAPAADD WREDLLDFLS
4861 VSAGLETRPP LAAGLEQRDN VSAAIAECLG VGQTGKGGLG CDELAQVFLV ARQLKQLSGQ
4921 LDSCSPIQVR PLCWWTRGRG EEVRALSRQL GGQPLAGRVA ACGHFQIPHA QEVLDSLVEA
4981 LEEIHGSLVY S
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