LOCUS AKO86660.1 4342 aa PRT BCT 27-AUG-2015
DEFINITION Pseudomonas aeruginosa DSM 50071 = NBRC 12689 peptide
synthase protein.
ACCESSION CP012001-2527
PROTEIN_ID AKO86660.1
SOURCE Pseudomonas aeruginosa DSM 50071 = NBRC 12689
ORGANISM Pseudomonas aeruginosa DSM 50071 = NBRC 12689
Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
Pseudomonadaceae; Pseudomonas.
REFERENCE 1 (bases 1 to 6317050)
AUTHORS Nakano,K., Terabayashi,Y., Shiroma,A., Shimoji,M., Tamotsu,H.,
Ashimine,N., Ohki,S., Shinzato,M., Teruya,K., Satou,K. and
Hirano,T.
TITLE First Complete Genome Sequence of Pseudomonas aeruginosa (Schroeter
1872) Migula 1900 (DSM 50071T), Determined Using PacBio
Single-Molecule Real-Time Technology
JOURNAL Genome Announc 3 (4), e00932-15 (2015)
PUBMED 26294631
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 6317050)
AUTHORS Nakano,K., Terabayashi,Y., Shiroma,A., Shimoji,M., Tamotsu,H.,
Ashimine,N., Ohki,S., Shinzato,M., Teruya,K., Satou,K. and
Hirano,T.
TITLE Direct Submission
JOURNAL Submitted (01-JUL-2015) Research and Development Division, Okinawa
Institute of Advanced Sciences, Okinawa Biotechnology Business
Support Center, Suite109, 5-1, Suzaki, Uruma, Okinawa 904-2234,
Japan
COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (released 2013). Information about the Pipeline can be
found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
##Genome-Assembly-Data-START##
Assembly Method :: HGAP3 v. 2.3.0
Genome Coverage :: 843x
Sequencing Technology :: PacBio
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Date :: 07/02/2015 10:33:57
Annotation Pipeline :: NCBI Prokaryotic Genome Annotation
Pipeline
Annotation Method :: Best-placed reference protein set;
GeneMarkS+
Annotation Software revision :: 2.10
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;
repeat_region
Genes :: 5,805
CDS :: 5,710
Pseudo Genes :: 18
CRISPR Arrays :: 3
rRNAs :: 12 (5S, 16S, 23S)
tRNAs :: 64
ncRNA :: 1
Frameshifted Genes :: 11
##Genome-Annotation-Data-END##
FEATURES Qualifiers
source /organism="Pseudomonas aeruginosa DSM 50071 = NBRC 12689"
/mol_type="genomic DNA"
/strain="DSM 50071"
/culture_collection="DSM:50071"
/type_material="type strain of Pseudomonas aeruginosa"
/db_xref="taxon:1123015"
protein /locus_tag="PA50071_12875"
/inference="EXISTENCE: similar to AA
sequence:RefSeq:WP_019726236.1"
/note="catalyzes the specific recognition and activation
of amino acids during peptide synthesis; involved in the
biosynthesis of the peptide chain of pyoverdines; Derived
by automated computational analysis using gene prediction
method: Protein Homology."
/transl_table=11
BEGIN
1 MMDAFELPTT LVQALRRRAV QEPERLALRF LAEDDGEGVV LSYRDLDLRA RSIAAALQAH
61 AQLGDRAVLL FPSGPDYVAA FFGCLYAGVI AVPAYPPESA RRHHQERLLS IIADAEPRLV
121 LTTADLREPL LQMNAQLSAA NAPQLLCVDQ LDPAVAEAWD EPQVRPEHIA FLQYTSGSTA
181 LPKGVQVSHG NLVANEVLIR RGFGIGADDV IVSWLPLYHD MGLIGGLLQP IFSGVPCVLM
241 SPRYFLERPV RWLEAISQYG GTVSGGPDFA YRLCSERVAE SALQRLDLSG WRVAFSGSEP
301 IRQDSLERFA EKFAASRFDA SSFFACYGLA EATLFVTGGQ RGQGIPALAV DGEALARNRI
361 AEGEGSVLMC CGRSQPEHAV LIVDAASGEV LGDDNVGEIW AAGPSIAHGY WRNPEASAKT
421 FVERDGRTWL RTGDLGFLRD GELFVTGRLK DMLIVRGHNL YPQDIERTVE SEVPSARKGR
481 VAAFAVTVDG EEGIGIAAEI GRGVQKSVPA QELIDSIRQA VAEAYQEAPK VVALLNPGAL
541 PKTSSGKLQR SACRLRLEDG SLDSYALFPG LQAVQEAQPP AGDDELLARI GEIWKARLGV
601 AQVAPRDHFF LLGGNSIGAA QVVAQVRDSL GVALDLRQLF EAPTLQAFSA TVARQLAAGL
661 PAEAPMAHLP RGVDLPQSAA QQRLWLTWQI DPQSAAYNIP GGLRLRGELD EAALRASFQR
721 LVERHEALRT RFLERDGAAL QRIDERGEFA WQFVDLAALA EHERAAAAAQ RREAEAQQPF
781 DLEKGPLLRV SLVRLDEQEH QLWVTLHHIV ADGWSLNLLL DEFSRLYAEA CGGQPADLAP
841 LELHYAEFAA WQRQWLDAGE GARQLAYWRE RLGDTAPVLE LATDHPRTAR QASPAARYSL
901 RVDEALARAI REAALDHEAS VFMWLLAAFQ ALLHRHSGQG EIRIGVPSAN RQRLETQGLV
961 GFFINTLVLR GTPRARQPFA ALLGEAREAT LGAQANQDLP FDQVLAACGQ GGQLFQVLFN
1021 HQQRDLSALR RLPGLLADEL PWHSREAKFD LQLQSEEDAR GRLTLSFDYA ADLFDEASIR
1081 RFAAQYLELL RQVAEDPQRC LGDIALVDAE QAAHLAEWGS APCEPARAWL PELLERQLVQ
1141 SAERVALEWD GGSLGYAELH ARANRLAHYL RDKGVGPDVR VAICAERSPQ LLVGLLAIVK
1201 AGGAYVPLDP DYPSERLAYM LADSGVELLL TQAHLFERLP GAEGVTPICL DSLKLDNWPS
1261 QAPGLHLHGD NLAYVIYTSG STGQPKGVGN THAALAERLQ WMQATYALDG DDVLMQKAPV
1321 SFDVSVWECF WPLVTGCRLV LAAPGEHRDP ARLVELVRQF GVTTLHFVPP LLQLFIDEPG
1381 VAACGSLRRL FSGGEALPAE LRNRVLQRLP AVALHNRYGP TETAINVTHW QCRAEDGERS
1441 PIGRPLGNVV CRVLDAEFNL LPAGVAGELC IGGLGLARGY LGRPALSAER FVADPFSADG
1501 ERLYRTGDRA RWNADGVLEY LGRLDQQVKL RGFRIEPEEI QARLLAQPGV AQAVVVIREG
1561 VAGSQLVGYY TGAAGAEAEA EQNQRLRAAL QAELPEYMVP AQLMRLAQMP LGPSGKLDTR
1621 ALPEPVWQQR EHVEPRTELQ RRIAAIWSEV LGLPRVGLRD DFFELGGHSL LATRIVSRTR
1681 QACDVELPLR ALFEASELEA FCEQVRAAQA AGRTDSHGAI RRIDREQPVP LSYSQQRMWF
1741 LWQLEPDSPA YNVGGLARLS GPLDVARFEA ALQALVLRHE TLRTTFPSVD GVPVQRVHSD
1801 GGLHMDWQDF SALDRDSRRQ HLQTLADSEA HRPFDLESGP LLRVCMVKMA EREHYLVVTL
1861 HHIVTEGWAM DIFARELGAL YEAFLDDRES PLEPLPVQYL DYSVWQREWL ESGERQRQLD
1921 YWKAQLGNEH PLLELPGDRP RPPVQSHQGD LYRFDLSPEL AERVRRFNAA RGLTMFMTMT
1981 ATLAALLYRY SGQQDLRIGA PVANRIRPES EGLIGAFLNT QVLRCRLDGQ MSVGELLEQV
2041 RQTVIDGQSH QDLPFDHLVE ALQPPRSAAY NPLFQVMCNV QRWEFQQTRQ LAGMTVEYIA
2101 NDARATKFDL NLEVTDLDQR LGCCLTYSRD LFDEPRIARM AGHWQNLLEA LLGDPQRRIA
2161 ELPLFAAEER KQLLLAGTAG EAGLQDTLHG LFAARVAASP QAPALTFAGQ TLSYAELDAR
2221 SNRLARVLRS HGVGPEVRVG LALERSLEMV VGLLAILKAG GAYVPLDPEY PLERLQYMIE
2281 DSGVRLLLSH AALFEALGEL PAGVARWCLE EDGPALDAED PAPLAALSGP QHQAYLIYTS
2341 GSTGKPKGVA VSHGEIAMHC AAVIERFGMR AEDCELHFYS INFDAASERL LAPLLCGARV
2401 VLRAQGQWGA EEICELIRAE GVSILGFTPS YGSQLAQWLE SQGRQLPVRM CITGGEALTG
2461 EHLQRIRQAF APASFFNAYG PTETVVMPLA CLAPERLEEG AASVPIGSVV GARVAYILDA
2521 DLALVPQGAT GELYVGGAGL ARGYHERPAL SAERFVPDPF AAEGGRLYRT GDLVRLCDNG
2581 QVEYVGRIDH QVKIRGFRIE LGEIEARLLE HPQVREALVL ALDSPSGKQL AGYVASAVAE
2641 QDEDAQAALR EALKTHLKQQ LPDYMVPAHL LLLASLPLTA NGKLDRRALP APDPALNRQA
2701 YEAPRSVLEQ QLAGVWREVL NVERVGLGDN FFELGGDSIL SIQVVSRARQ LGIHFSPRDL
2761 FQHQTVQSLA AVARHSQASQ AEQGPVQGDS ALTPIQHWFF DLPLARREHW NQSLLLQPRQ
2821 AIDLGLLRKS LQRLVEQHDA LRLAFRQVDG EWLAQHRPLH EQELLWHVPV QSFDECAELF
2881 AKAQRSLDLE QGPLLRAVLV DGPAGEQRLL LAIHHLVVDG VSWRVLLEDL QQVYRQLAEG
2941 AEPALPAKTS AFRDWAGRLQ AYAGSESLRE ELGWWQARLG GQPVEWPCDR PQGDNREALA
3001 ESVSLRLDPQ RTRQLLQQAP AAYRTQVNDL LLTALARVLC RWSGQPSTLV QLEGHGREAL
3061 FDDIDLTRSV GWFTSAYPLR LTPAQSPGES IKAIKEQLRA VPHKGLGYGV LRYLADPAVR
3121 QAMAALPTAP ITFNYLGQFD QSFADALFQP LDQPTGPIHD EQAPLPNELS VDGQVYGGEL
3181 VLRWTYSRER YDARTVNELA QAYLAELQAL IEHCLEDGAG GLTPSDFPLA QLSQAQLDAL
3241 AVPAGEIEDV YPLTPMQEGL LLHTLLEPGT GIYYMQDRYR IDSPLDPERF AAAWQAVVAR
3301 HEALRASFVW NAGETMLQVI HKPGRTRIEF LDWSELPEDG HEERLQALHK REREAGFDLL
3361 EQPPFHLRLI RLGEARYWFM MSNHHILIDA WCRGLLMNDF FEIYGALGEG RPANLPTPPR
3421 YRDYIAWLQR QDLEQSRRWW SESLRGFERP TLVPSDRPFL REHAGESGGM IVGDRYTRLD
3481 AADGARLREL AQRYQLTVNT FAQAAWALTL RRFSGERDVL FGVTVAGRPV GMPEMQRTVG
3541 LFINSIPLRV QMPAAGQRCT VREWLNRLFE RNLELREHEH LPLVAIQESS ELPKGQPLFD
3601 SLFVFENAPV EVSVLDRAQS LNASSDSGRT HTNFPLTVVC YPGDDLGLHL SYDQRYFEAP
3661 TVERLLGEFK RLLLALADGF HGELEALPLL GEDERDFLLD GCNRSARDYP LEQGYVRLFE
3721 AQVAAHPQRI AASCLEQRWS YAELNRRANR LGHALRAAGV GIDQPVALLA ERGLDLLGMI
3781 VGSFKAGAGY LPLDPGHPTQ RLTRIVELSR TPVLVCTQAC REQALALFDE LGCVDRPRLL
3841 VWDEIQQGEG AEHDPQVYSG PQNLAYVIYT SGSTGLPKGV MVEQAGMLNN QLSKVPYLEL
3901 DENDVIAQTA SQSFDISVWQ FLAAPLFGAR VAIVPNAIAH DPQGLLAHVG EQGITVLESV
3961 PSLIQGMLAE ERQALDGLRW MLPTGEAMPP ELARQWLKRY PRIGLVNAYG PAECSDDVAF
4021 FRVDLASTES TYLPIGSPTD NNRLYLLGAG ADDAFELVPL GAVGELCVAG TGVGRGYVGD
4081 PLRTAQAFVP HPFGAPGERL YRTGDLARRR ADGVLEYVGR IDHQVKIRGF RIELGEIEAR
4141 LHERADVREA AVAVQEGANG KYLVGYLVPG ETPRSSADSP AGLMVEQGAW FERIKQQLRA
4201 DLPDYMVPLH WLVLDRMPLN ANGKLDRKAL PALDIGQMQN QAYQAPRNEL EETLARIWAE
4261 VLKVERVGVF DNFFELGGHS LLATQIASRV QKALQRNVPL RAMFECTTVE ELASYIESLA
4321 PSEISEQKAE RLNDLMSKLE ML
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