LOCUS AKO86597.1 1062 aa PRT BCT 27-AUG-2015 DEFINITION Pseudomonas aeruginosa DSM 50071 = NBRC 12689 transporter protein. ACCESSION CP012001-2462 PROTEIN_ID AKO86597.1 SOURCE Pseudomonas aeruginosa DSM 50071 = NBRC 12689 ORGANISM Pseudomonas aeruginosa DSM 50071 = NBRC 12689 Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 6317050) AUTHORS Nakano,K., Terabayashi,Y., Shiroma,A., Shimoji,M., Tamotsu,H., Ashimine,N., Ohki,S., Shinzato,M., Teruya,K., Satou,K. and Hirano,T. TITLE First Complete Genome Sequence of Pseudomonas aeruginosa (Schroeter 1872) Migula 1900 (DSM 50071T), Determined Using PacBio Single-Molecule Real-Time Technology JOURNAL Genome Announc 3 (4), e00932-15 (2015) PUBMED 26294631 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 6317050) AUTHORS Nakano,K., Terabayashi,Y., Shiroma,A., Shimoji,M., Tamotsu,H., Ashimine,N., Ohki,S., Shinzato,M., Teruya,K., Satou,K. and Hirano,T. TITLE Direct Submission JOURNAL Submitted (01-JUL-2015) Research and Development Division, Okinawa Institute of Advanced Sciences, Okinawa Biotechnology Business Support Center, Suite109, 5-1, Suzaki, Uruma, Okinawa 904-2234, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP3 v. 2.3.0 Genome Coverage :: 843x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 07/02/2015 10:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 2.10 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 5,805 CDS :: 5,710 Pseudo Genes :: 18 CRISPR Arrays :: 3 rRNAs :: 12 (5S, 16S, 23S) tRNAs :: 64 ncRNA :: 1 Frameshifted Genes :: 11 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Pseudomonas aeruginosa DSM 50071 = NBRC 12689" /mol_type="genomic DNA" /strain="DSM 50071" /culture_collection="DSM:50071" /type_material="type strain of Pseudomonas aeruginosa" /db_xref="taxon:1123015" protein /locus_tag="PA50071_12550" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_003160388.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MNFSQFFIQR PIFAAVLSLL ILIGGAISLF QLPISEYPEV VPPTVVVRAN FPGANPKVIG 61 ETVASPLEQA ITGVENMLYM SSQSTSDGKL TLTITFALGT DLDNAQVQVQ NRVTRTEPKL 121 PEEVTRLGIT VDKASPDLTM VVHLTSPDNR YDMLYLSNYA VLNVKDELAR LDGVGDVQLF 181 GLGDYSLRVW LDPNKVASRN LTATDVVNAI REQNRQVAAG TLGAPPAPSD TSFQLSINTQ 241 GRLVTEEEFE NIIIRAGANG EITRLRDIAR VELGSNQYAL RSLLNNKPAV AIPIFQRPGS 301 NAIEISNLVR EKMAELKHSF PQGMDYSIVY DPTIFVRGSI EAVVHTLFEA LVLVVLVVIL 361 FLQTWRASII PLAAVPVSLI GTFAVMHMLG FSLNALSLFG LVLAIGIVVD DAIVVVENVE 421 RNIGLGLKPV EATKRAMREV TGPIIATALV LCAVFIPTAF ISGLTGQFYR QFALTIAIST 481 VISAFNSLTL SPALAAVLLK GHHEPKDRFS VFLDKLLGSW LFRPFNRFFD RASHGYVGTV 541 NRVLRGSSIA LLVYGGLMVL TYFGFSSTPT GFVPQQDKQY LVAFAQLPDA ASLDRTEAVI 601 KQMSEIALAQ PGVADSVAFP GLSINGFTNS PNSGIVFTPL KPFDERKDPS QSAGAIAAAL 661 NAKYADIQDA YIAIFPPPPV QGLGTIGGFR LQIEDRGNQG YEELFKQTQN IITKARALPE 721 LEPSSVFSSY QVNVPQIDAD IDREKAKTHG VAISDIFDTL QVYLGSLYAN DFNRFGRTYQ 781 VNVQAEQQFR LEPEQIGQLK VRNNLGEMVP LASFIKVSDT SGPDRVMHYN GFITAELNGA 841 PAAGYSSGQA QAAIEKLLKE ELPNGMTYEW TELTYQQILA GNTALFVFPL CVLLAFLVLA 901 AQYESWSLPL AVILIVPMTL LSAITGVILA GSDNNIFTQI GLIVLVGLAC KNAILIVEFA 961 KDKQEEGMDR VAAVLEACRL RLRPILMTSI AFIMGVVPLV ISTGAGAEMR HAMGVAVFSG 1021 MIGVTFFGLL LTPVFYVLIR RFVENREARR AANDKGLPEV HA //