LOCUS AKO86566.1 1036 aa PRT BCT 27-AUG-2015 DEFINITION Pseudomonas aeruginosa DSM 50071 = NBRC 12689 multidrug transporter protein. ACCESSION CP012001-2429 PROTEIN_ID AKO86566.1 SOURCE Pseudomonas aeruginosa DSM 50071 = NBRC 12689 ORGANISM Pseudomonas aeruginosa DSM 50071 = NBRC 12689 Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 6317050) AUTHORS Nakano,K., Terabayashi,Y., Shiroma,A., Shimoji,M., Tamotsu,H., Ashimine,N., Ohki,S., Shinzato,M., Teruya,K., Satou,K. and Hirano,T. TITLE First Complete Genome Sequence of Pseudomonas aeruginosa (Schroeter 1872) Migula 1900 (DSM 50071T), Determined Using PacBio Single-Molecule Real-Time Technology JOURNAL Genome Announc 3 (4), e00932-15 (2015) PUBMED 26294631 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 6317050) AUTHORS Nakano,K., Terabayashi,Y., Shiroma,A., Shimoji,M., Tamotsu,H., Ashimine,N., Ohki,S., Shinzato,M., Teruya,K., Satou,K. and Hirano,T. TITLE Direct Submission JOURNAL Submitted (01-JUL-2015) Research and Development Division, Okinawa Institute of Advanced Sciences, Okinawa Biotechnology Business Support Center, Suite109, 5-1, Suzaki, Uruma, Okinawa 904-2234, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP3 v. 2.3.0 Genome Coverage :: 843x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 07/02/2015 10:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 2.10 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 5,805 CDS :: 5,710 Pseudo Genes :: 18 CRISPR Arrays :: 3 rRNAs :: 12 (5S, 16S, 23S) tRNAs :: 64 ncRNA :: 1 Frameshifted Genes :: 11 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Pseudomonas aeruginosa DSM 50071 = NBRC 12689" /mol_type="genomic DNA" /strain="DSM 50071" /culture_collection="DSM:50071" /type_material="type strain of Pseudomonas aeruginosa" /db_xref="taxon:1123015" protein /locus_tag="PA50071_12385" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_003111751.1" /note="Part of a tripartite efflux system composed of MdtA, MdtB and MdtC which confers resistance against novobiocin and deoxycholate; Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MSLSTPFIRR PVATTLLTLA LLLAGTLSFG LLPVAPLPNV DFPAIVVSAS LPGASPETMA 61 SSVATPLERS LGRIAGISEM TSSSSLGSTT VVLVFDLEKD IDGAAREVQA AINGAMSLLP 121 SGMPNNPSYR KANPSDMPIM VLTLTSETQS RGEMYDLAST VLAPKLSQVQ GVGQVSIGGS 181 SLPAVRVDLN PDAMSQYGLS LDSVRTAIAA ANSNGPKGAV EKDDKHWQVD ANDQLRKARE 241 YEPLVIHYNA DNGAAVRLGD VAKVSDSVED VRNAGFSDDL PAVLLIVTRQ PGANIIEATD 301 AIHAQLPVLQ ELLGPQVKLN VMDDRSPSIR ASLEEAELTL LISVALVILV VFLFLRNGRA 361 TLIPSLAVPV SLIGTFAVMY LCDFSLNNLS LMALIIATGF VVDDAIVVVE NIARRIEEGD 421 PPIQAAITGA RQVGFTVLSM TLSLVAVFIP LLLMGGLTGR LFREFAVTLS AAILVSLVVS 481 LTLTPMLCAR LLRPLKRPEG ASLARRSDRF FAAFMLRYRA SLGWALEHSR LMVVIMLACI 541 AMNLWLFVVV PKGFLPQQDS GRLRGYAVAD QSISFQSLSA KMGEYRKILS SDPAVENVVG 601 FIGGGRWQSS NTGSFFVTLK PIGERDPVEK VLTRLRERIA KVPGAALYLN AGQDVRLGGR 661 DSNAQYEFTL RSDDLTLLRE WAPKVEAAMR KLPQLVDVNS DSQDKGVQTR LVIDRDRAAT 721 LGINVEMVDA VLNDSFGQRQ VSTIFNPLNQ YRVVMEVDQQ YQQSPEILRQ VQVIGNDGQR 781 VPLSAFSHYE PSRAPLEVNH QGQFAATTLS FNLAPGAQIG PTREAIMQAL EPLHIPVDVQ 841 TSFEGNAGAV QDTQNQMPWL ILLALLAVYI VLGILYESYV HPLTILSTLP SAGVGALLAL 901 ILCRSELSLI ALIGIILLIG IVKKNAIMMI DFALEAERNH GLSPREAILE ACMMRFRPIM 961 MTTLAALLGA LPLIFGIGGD AALRRPLGIT IVGGLIGSQL LTLYTTPVVY LYLDRLRHWV 1021 NQKRGVRTDG ALETPL //