LOCUS AKO86565.1 1043 aa PRT BCT 27-AUG-2015 DEFINITION Pseudomonas aeruginosa DSM 50071 = NBRC 12689 multidrug transporter protein. ACCESSION CP012001-2428 PROTEIN_ID AKO86565.1 SOURCE Pseudomonas aeruginosa DSM 50071 = NBRC 12689 ORGANISM Pseudomonas aeruginosa DSM 50071 = NBRC 12689 Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 6317050) AUTHORS Nakano,K., Terabayashi,Y., Shiroma,A., Shimoji,M., Tamotsu,H., Ashimine,N., Ohki,S., Shinzato,M., Teruya,K., Satou,K. and Hirano,T. TITLE First Complete Genome Sequence of Pseudomonas aeruginosa (Schroeter 1872) Migula 1900 (DSM 50071T), Determined Using PacBio Single-Molecule Real-Time Technology JOURNAL Genome Announc 3 (4), e00932-15 (2015) PUBMED 26294631 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 6317050) AUTHORS Nakano,K., Terabayashi,Y., Shiroma,A., Shimoji,M., Tamotsu,H., Ashimine,N., Ohki,S., Shinzato,M., Teruya,K., Satou,K. and Hirano,T. TITLE Direct Submission JOURNAL Submitted (01-JUL-2015) Research and Development Division, Okinawa Institute of Advanced Sciences, Okinawa Biotechnology Business Support Center, Suite109, 5-1, Suzaki, Uruma, Okinawa 904-2234, Japan COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: HGAP3 v. 2.3.0 Genome Coverage :: 843x Sequencing Technology :: PacBio ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 07/02/2015 10:33:57 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 2.10 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 5,805 CDS :: 5,710 Pseudo Genes :: 18 CRISPR Arrays :: 3 rRNAs :: 12 (5S, 16S, 23S) tRNAs :: 64 ncRNA :: 1 Frameshifted Genes :: 11 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Pseudomonas aeruginosa DSM 50071 = NBRC 12689" /mol_type="genomic DNA" /strain="DSM 50071" /culture_collection="DSM:50071" /type_material="type strain of Pseudomonas aeruginosa" /db_xref="taxon:1123015" protein /locus_tag="PA50071_12380" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_015648918.1" /note="Part of a tripartite efflux system composed of MdtA, MdtB and MdtC which confers resistance against novobiocin and deoxycholate; Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MNPSRPFILR PVATTLLMVA ILLSGLIAYR FLPISALPEV DYPTIQVVTL YPGASPEIMT 61 SSITAPLENQ LGQIPGLNEM SSSSSGGASV ITLQFSLQSN LDVAEQEVQA AINAAQSLLP 121 NDLPNQPVFS KVNPADAPIL TLAVMSDGMP LPQIQDLVDT RLAQKISQIS GVGLVSISGG 181 QRPAVRVRAN PTALAAAGLS LEDLRSTVTS NNLNGPKGSF DGPTRASTLD ANDQLRSADA 241 YRDLIIAYKN GSPLRIRDVA SVEDDAENVR LAAWANNLPA VVLNIQRQPG ANVIEVVDRI 301 KALLPQLQST LPGNLDVQVL TDRTTTIRAS VKDVQFELAL AVALVVMVTF LFLRNVYATL 361 IPSFAVPLSL IGTFGVMYLS GFSINNLTLM ALTIATGFVV DDAIVMVENI ARYLEQGDSP 421 LEAALKGSKQ IGFTIISLTF SLIAVLIPLL FMGDVAGRLF REFAITLAVA ILISGFVSLT 481 LTPMLSAKLL RHIDEDQQGR FARAAGRVID GLIAQYAKAL RVVLRHQPLT LLVAIATLAL 541 TALLYLAMPK GFFPVQDTGV IQGVAEAPQS ISFQAMSERQ RALAEVVLKD PAVASLSSYI 601 GVDGSNPTLN TGRLLINLKP HSERDVTASE VIQRLQPELD HLPGIKLYMQ PVQDLTIEDR 661 VARTQYQFTL QDADPDVLAE WVPKLVARLQ ELPQLADVAS DWQDKGLQAY LNIDRDTASR 721 LGVKLSDIDS VLYNAFGQRL ISTIFTQATQ YRVVLEVAPQ FQLGPQALEQ LYVPSSDGTQ 781 VRLSSLAKVE ERHTLLAINH IAQFPSATLS FNLAKGYSLG EAVEAIRGVE ASLELPLSMQ 841 GSFRGAALAF EASLSNTLLL ILASVVTMYI VLGILYESFI HPVTILSTLP SAGVGALLAL 901 MLAGQEIGIV AIIGIILLIG IVKKNAIMMI DFALDAERNE GKPPHEAIYQ ACLLRFRPIL 961 MTTMAALLGA LPLMLAGGAG AELRQPLGIT MVGGLLLSQV LTLFTTPVIY LYFDRLARRW 1021 AAWRKQRGLD LNTEAGFDGD AGR //