LOCUS AKO84600.1 2474 aa PRT BCT 27-AUG-2015
DEFINITION Pseudomonas aeruginosa DSM 50071 = NBRC 12689 chemotaxis
protein CheA protein.
ACCESSION CP012001-410
PROTEIN_ID AKO84600.1
SOURCE Pseudomonas aeruginosa DSM 50071 = NBRC 12689
ORGANISM Pseudomonas aeruginosa DSM 50071 = NBRC 12689
Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
Pseudomonadaceae; Pseudomonas.
REFERENCE 1 (bases 1 to 6317050)
AUTHORS Nakano,K., Terabayashi,Y., Shiroma,A., Shimoji,M., Tamotsu,H.,
Ashimine,N., Ohki,S., Shinzato,M., Teruya,K., Satou,K. and
Hirano,T.
TITLE First Complete Genome Sequence of Pseudomonas aeruginosa (Schroeter
1872) Migula 1900 (DSM 50071T), Determined Using PacBio
Single-Molecule Real-Time Technology
JOURNAL Genome Announc 3 (4), e00932-15 (2015)
PUBMED 26294631
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 6317050)
AUTHORS Nakano,K., Terabayashi,Y., Shiroma,A., Shimoji,M., Tamotsu,H.,
Ashimine,N., Ohki,S., Shinzato,M., Teruya,K., Satou,K. and
Hirano,T.
TITLE Direct Submission
JOURNAL Submitted (01-JUL-2015) Research and Development Division, Okinawa
Institute of Advanced Sciences, Okinawa Biotechnology Business
Support Center, Suite109, 5-1, Suzaki, Uruma, Okinawa 904-2234,
Japan
COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (released 2013). Information about the Pipeline can be
found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
##Genome-Assembly-Data-START##
Assembly Method :: HGAP3 v. 2.3.0
Genome Coverage :: 843x
Sequencing Technology :: PacBio
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Date :: 07/02/2015 10:33:57
Annotation Pipeline :: NCBI Prokaryotic Genome Annotation
Pipeline
Annotation Method :: Best-placed reference protein set;
GeneMarkS+
Annotation Software revision :: 2.10
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;
repeat_region
Genes :: 5,805
CDS :: 5,710
Pseudo Genes :: 18
CRISPR Arrays :: 3
rRNAs :: 12 (5S, 16S, 23S)
tRNAs :: 64
ncRNA :: 1
Frameshifted Genes :: 11
##Genome-Annotation-Data-END##
FEATURES Qualifiers
source /organism="Pseudomonas aeruginosa DSM 50071 = NBRC 12689"
/mol_type="genomic DNA"
/strain="DSM 50071"
/culture_collection="DSM:50071"
/type_material="type strain of Pseudomonas aeruginosa"
/db_xref="taxon:1123015"
protein /locus_tag="PA50071_02060"
/inference="EXISTENCE: similar to AA
sequence:RefSeq:WP_012613502.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/transl_table=11
BEGIN
1 MGDRHDYVAL EWVKGEIAET LKQARQALEA FVENPQDPTR MRFCLTYVHQ VQGTLQMVEF
61 YGAALLAEEM EQLVQALLDG RVPNQGEALE VLMQAILQLP VYLDRIQTAR RDLPMVVLPL
121 LNDLRAARGE KLLSETSLFA PDLSQRQPQL DGEAIAQLRT DELGGLLRKL RQTQQMALVG
181 LLRNQDVATS LGYLARVYAR LEGLCREAPL GPLWSIASGL VEGLANGSVV NSASVRTLLR
241 QLDRELKRLV EQGADGLNQA APDELVKNLL FYVAKAPSQS PRIRALKEQY RLDEALPDHE
301 TVDAERARLA GPDRDAMRSV VGALCEELVR IKDSLDLFVR SDRGHPSELD ALLAPLKQIA
361 DTLAVLGFGQ PRKVILDQLD VIHALAQGRR EPSDAILMDV AGALLYVEAT LAGMAGPGDE
421 RNSEESRLPT TDVAQIHQLV IKEARNGLEQ AKDAIIEFIA SQWNHEHLAR VPELLTQVRG
481 GLAMIPLERA ATLLETCNRY IQEQLLARKA VPDWQSLDTL ADAITSVEYY LERLSEDHAS
541 QSDLILDVAE DSLANLGYTL KPNSSAPAEP GLSGPAAIES PAAEPERPEA VVEVAETAEQ
601 PPADTAPAEA AREDAPQLAS DDNWTLGEVA PDAGEPSLDL ALDLPLDDSA EVPPALPEVV
661 EESGQPQSTP APARSLDDFS LDEIDLSGLD LPADAAPASG PAALADWSLP EQWGLGDDLA
721 QPAQAGETLD LSLEEPALSF DAPLESLEPL PALEPFDGSA EQELVLDALD PLPLDVALPE
781 AEGEVSAWEG SSLEELDLSD LDLPEVQLPE AEAEAEAPPA AEALASEAPA LSLAEVMAAP
841 VQPINPPAQN VPVSLLPPPA DEEPVDEELR EVFIEEAGEV LETIGRYLPA WKADHDDREA
901 LTEVRRAFHT LKGSGRMVRA LVIGELAWSI ENLFNRVLDR SIAASEPVQR VVDQVVALLP
961 ELVEEFAANA QRQRDDVDLL AATAHALAKG EPLPEPPAPD DGGVPPEAGA EQPSSLDNGV
1021 QAPPLADAPQ AAAEAQSDVE LLDPQLLEIF TNEAETHLEA LVGFLADCAR ELPQPVTDAL
1081 QRALHTLKGS AHMAGILPIA EIATPLEKLV KEYKSNLLAF DLREAELLHD AEQLFRIGLE
1141 QVGAQRPLNP IPGSDALLER IEALHQERIA SLEAERYSDA GERRDPLLIE AFLVEGMDIL
1201 LDAEDLLERW HEHPQERQEL SALREELSTL DRGARHAELP QVEELCQALL ALYDAVEEGR
1261 LAVSPAFFEE ARQAHEALIG MMDQVAAGLQ VTPRPERVAA LQELLEAPAA EAVPFIDPES
1321 LGADDFPPED EEPALPEAVF EEAGTPAEET VPAAPAPAPG RELDEEMVSI FLEEAVDILE
1381 SAGQALAQWQ AEPGALSSLS ALQRDLHTLK GGARMAEIAE IGDLAHELEA LYEGLVDRRY
1441 QHSPQLAGLL QACHDRLAEQ LDQLSAGQPL ADPHDLIQSI RRFRQGPVAE AATPGEAESP
1501 VEELVAPAVE EPAAPAAEAF EERDPELVEI FLEEGFDILD SAAAALQRWM DDVDNTIELE
1561 ALQRDLHTLK GGARMAEIGE IGDLAHELEF LYEGLCGGRL RASPALFGLL QRCHDELAEM
1621 LEAVRGHRTL PDGQALIAEI RRLRSDPDEQ LSVPTSVSLK PLAAKGAAAD ESEILDIFLE
1681 EADDLLENLE LALGRWDGGN GDAQPLDDLL RILHTLKGGA RLAGQTELGN LAHDLEQHLT
1741 DAQQQGAPWP DSLLLDAQSG LEGLQRQVDL LRERLAEDDE AGERPEPAQA LVQADDTDRA
1801 VASALAELTR LAPAAGAIMA AEAAPPAAPA TTLPFVRKAQ EAAQEAASRR APQELVKVPA
1861 ELLENLVNLA GETSIFRGRV EQQVSDVGFT LGEMESTIER VRDQLRRLDT ETQAQILSRH
1921 QADAERAGYE EFDPLEMDRY SQLQQLSRAL FESASDLLDL KETLAAKNRD AETLLLQQAR
1981 VNTELQEGLM RTRMVPFDRL VPRLRRIVRQ VAGELGKQVE FVVGNADGEM DRTVLERIVA
2041 PLEHMLRNAV DHGIESGETR RAAGKPEHGT IRLNIGREGG DILLTLSDDG AGIRLDAVRR
2101 KAIERGLMSA DSDLSDHEVL QFVLESGFST AEKVTQISGR GVGLDVANSE VKQLGGSVSI
2161 QTEPGQGTRF NVRLPFTVSV NRALMVLSGE DLYAVPLNTI EGIVRVSPYE LEALYDQRGE
2221 AGLDTPSFEY AGQSYELKYL GELLNNGQEP KLVGQSLPLP VILVRSSEHA VAVQVDSLAG
2281 SREIVVKSLG PQFAGVAGIS GATLLGDGRV VVILDLLATI RSRHALLGQE SRRERLALRQ
2341 EMAASESEQQ RPPLVMVVDD SVTVRKVTTR LLERNGMNVL TAKDGVDAIA QLQEHRPDIL
2401 LLDIEMPRMD GFEVATLVRH DERLGNLPII MITSRTGEKH RERALGIGVN QYLGKPYQET
2461 ELLEAIQSLV GQHE
//